RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 ZNF585AQ6P3V2 769 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 UNQ6494/PRO21346Q6UXR6 183 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 SPATS2Q86XZ4 545 aaKnown RBP6.15□□□□□ -1.42
CNOT4-209ENST00000473470 ANKRD13AQ8IZ07 590 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 ANKRD53Q8N9V6 530 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 OR14C36Q8NHC7 312 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 PPP1R14CQ8TAE6 165 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 ZNF496Q96IT1 587 aaPredicted RBP6.15□□□□□ -1.42
CNOT4-209ENST00000473470 ADOQ96SZ5 270 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 IL23AQ9NPF7 189 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 PLA2G3Q9NZ20 509 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 RCAN3Q9UKA8 241 aa6.15□□□□□ -1.42
CNOT4-209ENST00000473470 GOLGA8BA8MQT2 603 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 ANTXR2P58335 489 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 GRM7Q14831 915 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 IQSEC1Q6DN90 963 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 MFSD5Q6N075 450 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 GPR135Q8IZ08 494 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 ANKRD35Q8N283 1001 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 CLRN3Q8NCR9 226 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 GAB3Q8WWW8 586 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 AURKAIP1Q9NWT8 199 aaPredicted RBP6.14□□□□□ -1.43
CNOT4-209ENST00000473470 MAGEL2Q9UJ55 1249 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 ADAMTSL3P82987 1691 aa6.14□□□□□ -1.43
CNOT4-209ENST00000473470 C2orf78A6NCI8 922 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 GAAP10253 952 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 MSX2P35548 267 aaPredicted RBP6.13□□□□□ -1.43
CNOT4-209ENST00000473470 KIR2DL3P43628 341 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 TMPRSS15P98073 1019 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 ATP2C1P98194 919 aaPredicted RBP6.13□□□□□ -1.43
CNOT4-209ENST00000473470 STAT4Q14765 748 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 R3HDM1Q15032 1099 aaKnown RBP6.13□□□□□ -1.43
CNOT4-209ENST00000473470 FSCN1Q16658 493 aaKnown RBP6.13□□□□□ -1.43
CNOT4-209ENST00000473470 CCDC62Q6P9F0 684 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 D2HGDHQ8N465 521 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 UBR7Q8N806 425 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 RAX2Q96IS3 184 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 TCF25Q9BQ70 676 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 COL4A3BPQ9Y5P4 624 aa6.13□□□□□ -1.43
CNOT4-209ENST00000473470 PRSS38A1L453 326 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 MTHFD2P13995 350 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 HNRNPLP14866 589 aaKnown RBP eCLIP6.12□□□□□ -1.43
CNOT4-209ENST00000473470 ACO1P21399 889 aaKnown RBP6.12□□□□□ -1.43
CNOT4-209ENST00000473470 ENPP1P22413 925 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 KRTAP10-2P60368 255 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 ADAM8P78325 824 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 SHROOM2Q13796 1616 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 ZXDCQ2QGD7 858 aaPredicted RBP6.12□□□□□ -1.43
CNOT4-209ENST00000473470 RNF219Q5W0B1 726 aaPredicted RBP6.12□□□□□ -1.43
CNOT4-209ENST00000473470 PALM2Q8IXS6 379 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 ARL8AQ96BM9 186 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 WWC2-AS2Q96NR7 200 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 MS4A5Q9H3V2 200 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.12□□□□□ -1.43
CNOT4-209ENST00000473470 RGS17Q9UGC6 210 aaPredicted RBP6.12□□□□□ -1.43
CNOT4-209ENST00000473470 USP18Q9UMW8 372 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 NOP58Q9Y2X3 529 aaKnown RBP6.12□□□□□ -1.43
CNOT4-209ENST00000473470 CDY2AQ9Y6F7 541 aa6.12□□□□□ -1.43
CNOT4-209ENST00000473470 GRIN2AQ12879 1464 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 FGD5Q6ZNL6 1462 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 A0A0A6YYK5 440 aaPredicted RBP6.11□□□□□ -1.43
CNOT4-209ENST00000473470 CAPN14A8MX76 684 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 GPR39O43194 453 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 IPO13O94829 963 aaKnown RBP6.11□□□□□ -1.43
CNOT4-209ENST00000473470 IBSPP21815 317 aaPredicted RBP6.11□□□□□ -1.43
CNOT4-209ENST00000473470 ACRV1P26436 265 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 NPEPPSP55786 919 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 FOXL1Q12952 345 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 SAFB2Q14151 953 aaKnown RBP eCLIP6.11□□□□□ -1.43
CNOT4-209ENST00000473470 CDSNQ15517 529 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.11□□□□□ -1.43
CNOT4-209ENST00000473470 MAMDC4Q6UXC1 1216 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 STRA8Q7Z7C7 330 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 WDR66Q8TBY9 1149 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 RPL10LQ96L21 214 aaKnown RBP6.11□□□□□ -1.43
CNOT4-209ENST00000473470 GPHA2Q96T91 129 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 SOX7Q9BT81 388 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 KRTAP9-3Q9BYQ3 159 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 KCTD10Q9H3F6 313 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 PCDH12Q9NPG4 1184 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 PRSS50Q9UI38 385 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 GIT1Q9Y2X7 761 aa6.11□□□□□ -1.43
CNOT4-209ENST00000473470 hCG_2014768A0A024R1R8 64 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 PPM1GO15355 546 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-209ENST00000473470 ALDH1A2O94788 518 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 LY86O95711 162 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 GYPEP15421 78 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 ID4P47928 161 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 MGAT5Q09328 741 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 UGT8Q16880 541 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 GAREM2Q75VX8 874 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 NECAB2Q7Z6G3 386 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 CMTM4Q8IZR5 234 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 ATL2Q8NHH9 583 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 TLR9Q9NR96 1032 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 TOPORSQ9NS56 1045 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-209ENST00000473470 STRCQ7RTU9 1775 aa6.1□□□□□ -1.43
CNOT4-209ENST00000473470 WASHC2AQ641Q2 1341 aa6.09□□□□□ -1.43
CNOT4-209ENST00000473470 LCHNA4D1U4 455 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms