RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 CNGA2Q16280 664 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 C11orf63Q6NUN7 778 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 TPH2Q8IWU9 490 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 RDH13Q8NBN7 331 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 CYP2W1Q8TAV3 490 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 MGARPQ8TDB4 240 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 PARVGQ9HBI0 331 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 PTPN22Q9Y2R2 807 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 AFF2P51816 1311 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 EEF2P13639 858 aaKnown RBP15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 SREBF1P36956 1147 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 IKQ13123 557 aaPredicted RBP15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 NFIL3Q16649 462 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 FAM98CQ17RN3 349 aaKnown RBP15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 DCAF4Q8WV16 495 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 HOMER3Q9NSC5 361 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 GGT7Q9UJ14 662 aa15.34■□□□□ 0.05
NHLRC3-204ENST00000473371 A0A1B0GUA9 196 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 FOSP01100 380 aaPredicted RBP15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 RARGP13631 454 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 PDE6CP51160 858 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 ACCSLQ4AC99 568 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 PHLDB3Q6NSJ2 640 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 TLDC1Q6P9B6 456 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 ZDHHC14Q8IZN3 488 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 RIMBP2O15034 1052 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 CHMP2AO43633 222 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 UBOX5O94941 541 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 GGPS1O95749 300 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 COMTP21964 271 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 HADHBP55084 474 aaKnown RBP15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 GPC5P78333 572 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 LRRC14Q15048 493 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 PPP2R5AQ15172 486 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 PRR5LQ6MZQ0 368 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 FBXO11Q86XK2 927 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 FAM178BQ8IXR5 827 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 STAMBPL1Q96FJ0 436 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 RUNDC3BQ96NL0 473 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 AGPAT3Q9NRZ7 376 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 CHORDC1Q9UHD1 332 aaPredicted RBP15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 MTUS1Q9ULD2 1270 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 AGAP1Q9UPQ3 857 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 PFASO15067 1338 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 C10orf71Q711Q0 1435 aa15.33■□□□□ 0.04
NHLRC3-204ENST00000473371 ANKRD63C9JTQ0 380 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 UBAP1LF5GYI3 381 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 SNX3O60493 162 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 EXOC3O60645 756 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 BCRP11274 1271 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 HOXA13P31271 388 aaPredicted RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 SCNN1DP51172 638 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 SLC30A10Q6XR72 485 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 STXBP4Q6ZWJ1 553 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 RBM17Q96I25 401 aaKnown RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 RSRC1Q96IZ7 334 aaKnown RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 CCDC17Q96LX7 622 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 UBE2TQ9NPD8 197 aaPredicted RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 PASKQ96RG2 1323 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 TAL1P17542 331 aaPredicted RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 COILP38432 576 aaPredicted RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 SLC15A2Q16348 729 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 TRAPPC3LQ5T215 181 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 ZNF746Q6NUN9 644 aaPredicted RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 C1orf186Q6ZWK4 172 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 OTUD6AQ7L8S5 288 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 EXOC3L1Q86VI1 746 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 DYDC2Q96IM9 177 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 BCS1LQ9Y276 419 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 ZBTB39O15060 712 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 ALAS1P13196 640 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 KCNJ1P48048 391 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 MYO1EQ12965 1108 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 RIPK1Q13546 671 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 NAA25Q14CX7 972 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 CRELD2Q6UXH1 353 aaPredicted RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 RPUSD2Q8IZ73 545 aaKnown RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 SYCP3Q8IZU3 236 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 ART4Q93070 314 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 HOOK2Q96ED9 719 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 ECT2Q9H8V3 914 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 USP15Q9Y4E8 981 aaPredicted RBP15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 PCDHA3Q9Y5H8 950 aa15.32■□□□□ 0.04
NHLRC3-204ENST00000473371 TCRBV7S2A1N4TA0A589 114 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 FAM196BA6NMK8 535 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 TCP11X1B4DZS4 312 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 PYGMP11217 842 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 NQO1P15559 274 aaKnown RBP15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 MMP14P50281 582 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 BFSP1Q12934 665 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 CALCOCO2Q13137 446 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 CRYMQ14894 314 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 LONRF1Q17RB8 773 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 SHROOM1Q2M3G4 852 aaPredicted RBP15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 ZNF720Q7Z2F6 126 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 RPS6KC1Q96S38 1066 aa15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 ROPN1BQ9BZX4 212 aaPredicted RBP15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 ROPN1Q9HAT0 212 aaPredicted RBP15.31■□□□□ 0.04
NHLRC3-204ENST00000473371 FGFR1OP2Q9NVK5 253 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms