RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 MICAL1Q8TDZ2 1067 aa24.98■■□□□ 1.59
PTP4A1-203ENST00000473334 CPB2Q96IY4 423 aa24.98■■□□□ 1.59
PTP4A1-203ENST00000473334 NECAB3Q96P71 396 aaPredicted RBP24.98■■□□□ 1.59
PTP4A1-203ENST00000473334 BHMT2Q9H2M3 363 aa24.98■■□□□ 1.59
PTP4A1-203ENST00000473334 IGFLR1Q9H665 355 aa24.98■■□□□ 1.59
PTP4A1-203ENST00000473334 RSAD1Q9HA92 442 aa24.98■■□□□ 1.59
PTP4A1-203ENST00000473334 PUF60Q9UHX1 559 aaKnown RBP24.98■■□□□ 1.59
PTP4A1-203ENST00000473334 PCDHGC5Q9Y5F6 944 aa24.98■■□□□ 1.59
PTP4A1-203ENST00000473334 NCLP19338 710 aaKnown RBP24.97■■□□□ 1.59
PTP4A1-203ENST00000473334 GTF2F1P35269 517 aaKnown RBP eCLIP24.97■■□□□ 1.593e-7■■□□□ 13.3
PTP4A1-203ENST00000473334 BCAR1P56945 870 aa24.97■■□□□ 1.59
PTP4A1-203ENST00000473334 KRT17Q04695 432 aa24.97■■□□□ 1.59
PTP4A1-203ENST00000473334 CDCA2Q69YH5 1023 aaPredicted RBP24.97■■□□□ 1.59
PTP4A1-203ENST00000473334 ZBTB8OSQ8IWT0 167 aa24.97■■□□□ 1.59
PTP4A1-203ENST00000473334 SLC39A11Q8N1S5 342 aa24.97■■□□□ 1.59
PTP4A1-203ENST00000473334 URGCPQ8TCY9 931 aa24.97■■□□□ 1.59
PTP4A1-203ENST00000473334 CSRNP2Q9H175 543 aa24.97■■□□□ 1.59
PTP4A1-203ENST00000473334 TBC1D13Q9NVG8 400 aa24.97■■□□□ 1.59
PTP4A1-203ENST00000473334 MUC3AQ02505 3323 aa24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 CARNS1A5YM72 827 aa24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 FSCN2O14926 492 aa24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 ZC3H11AO75152 810 aaKnown RBP eCLIP24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 ARF4P18085 180 aaPredicted RBP24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 LTBRP36941 435 aa24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 ALDH7A1P49419 539 aaKnown RBP24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 ERVFC1P60507 584 aa24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 RNASELQ05823 741 aaKnown RBP24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 PUS10Q3MIT2 529 aaKnown RBP24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 PTCRAQ6ISU1 281 aaPredicted RBP24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 SMG8Q8ND04 991 aaKnown RBP24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 EIF2AQ9BY44 585 aaKnown RBP24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 C2orf40Q9H1Z8 148 aa24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 PRMT7Q9NVM4 692 aaPredicted RBP24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 IPPQ9Y573 584 aa24.96■■□□□ 1.59
PTP4A1-203ENST00000473334 B4GALT5O43286 388 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 EYA4O95677 639 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 ITGA4P13612 1032 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 PDCP20941 246 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 CDC25AP30304 524 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 NAMPTP43490 491 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 NRIP1P48552 1158 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 ADAM15Q13444 863 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 PPP2R5AQ15172 486 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 ARL6IP4Q66PJ3 421 aaKnown RBP24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 PPP4R3CPQ6ZMV5 832 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 BRAPQ7Z569 592 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 EFHBQ8N7U6 833 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 BSNDQ8WZ55 320 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 PRIMPOLQ96LW4 560 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 MMTAG2Q9BU76 263 aaKnown RBP24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 NRDE2Q9H7Z3 1164 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 UBN1Q9NPG3 1134 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 DNM3Q9UQ16 869 aa24.95■■□□□ 1.58
PTP4A1-203ENST00000473334 E9PMD0 336 aa24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 LINC01565O15544 149 aa24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 PLPP4Q5VZY2 271 aa24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 RBM23Q86U06 439 aaKnown RBP24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 KIFAP3Q92845 792 aa24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 TCF25Q9BQ70 676 aa24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 TRIM6Q9C030 488 aaPredicted RBP24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 TLE6Q9H808 572 aa24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 ENTPD7Q9NQZ7 604 aa24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 KANSL3Q9P2N6 904 aa24.94■■□□□ 1.58
PTP4A1-203ENST00000473334 VPS37CA5D8V6 355 aaPredicted RBP24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 VWA3AA6NCI4 1184 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 GRXCR2A6NFK2 248 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 NT5C1B-RDH14C9J2C7 533 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 TBX10O75333 385 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 NDUFV1P49821 464 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 DLX2Q07687 328 aaPredicted RBP24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 FAM187BQ17R55 369 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 SLC27A1Q6PCB7 646 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 DEPTORQ8TB45 409 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 TMEM169Q96HH4 297 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 IFT74Q96LB3 600 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 CDCA3Q99618 268 aaPredicted RBP24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 GBP3Q9H0R5 595 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 FZD8Q9H461 694 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 NGRNQ9NPE2 291 aaKnown RBP24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 NCOR1O75376 2440 aa24.93■■□□□ 1.58
PTP4A1-203ENST00000473334 A0A1B0GUA9 196 aa24.92■■□□□ 1.58
PTP4A1-203ENST00000473334 FSD2A1L4K1 749 aa24.92■■□□□ 1.58
PTP4A1-203ENST00000473334 IL9P15248 144 aa24.92■■□□□ 1.58
PTP4A1-203ENST00000473334 HYIQ5T013 277 aa24.92■■□□□ 1.58
PTP4A1-203ENST00000473334 HACE1Q8IYU2 909 aa24.92■■□□□ 1.58
PTP4A1-203ENST00000473334 INTS4Q96HW7 963 aaKnown RBP24.92■■□□□ 1.58
PTP4A1-203ENST00000473334 FAM50BQ9Y247 325 aa24.92■■□□□ 1.58
PTP4A1-203ENST00000473334 BMP15O95972 392 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 GALTP07902 379 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 AFF1P51825 1210 aaKnown RBP24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 MAPK6Q16659 721 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 DUSP6Q16828 381 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 TMC7Q7Z402 723 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 KCNK18Q7Z418 384 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 CDR2LQ86X02 465 aaPredicted RBP24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 ZNF280BQ86YH2 543 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 KCTD17Q8N5Z5 321 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 NXF3Q9H4D5 531 aaKnown RBP24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 DNAJB4Q9UDY4 337 aa24.91■■□□□ 1.58
PTP4A1-203ENST00000473334 HES2Q9Y543 173 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms