RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 FXR2P51116 673 aaKnown RBP eCLIP23.07■■□□□ 1.28
EPHB3-202ENST00000473079 ZP2Q05996 745 aa23.07■■□□□ 1.28
EPHB3-202ENST00000473079 KCNC3Q14003 757 aa23.07■■□□□ 1.28
EPHB3-202ENST00000473079 CLUL1Q15846 466 aa23.07■■□□□ 1.28
EPHB3-202ENST00000473079 MCPH1Q8NEM0 835 aa23.07■■□□□ 1.28
EPHB3-202ENST00000473079 ASAP3Q8TDY4 903 aa23.07■■□□□ 1.28
EPHB3-202ENST00000473079 KHSRPQ92945 711 aaKnown RBP eCLIP23.07■■□□□ 1.28
EPHB3-202ENST00000473079 EPHX3Q9H6B9 360 aa23.07■■□□□ 1.28
EPHB3-202ENST00000473079 ENTPD7Q9NQZ7 604 aa23.07■■□□□ 1.28
EPHB3-202ENST00000473079 A0A087WWV3 80 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 TSPAN1O60635 241 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 NCLP19338 710 aaKnown RBP23.06■■□□□ 1.28
EPHB3-202ENST00000473079 MBTD1Q05BQ5 628 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 PDIA5Q14554 519 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 AMHR2Q16671 573 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 LONRF3Q496Y0 759 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 MRPL43Q8N983 215 aaKnown RBP23.06■■□□□ 1.28
EPHB3-202ENST00000473079 SMRP1Q8NCR6 262 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 NRDE2Q9H7Z3 1164 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 UBN1Q9NPG3 1134 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 KANSL3Q9P2N6 904 aa23.06■■□□□ 1.28
EPHB3-202ENST00000473079 INO80B-WBP1J3KQ70 363 aa23.05■■□□□ 1.28
EPHB3-202ENST00000473079 USO1O60763 962 aaKnown RBP23.05■■□□□ 1.28
EPHB3-202ENST00000473079 GALTP07902 379 aa23.05■■□□□ 1.28
EPHB3-202ENST00000473079 SSTR3P32745 418 aaPredicted RBP23.05■■□□□ 1.28
EPHB3-202ENST00000473079 TOB1P50616 345 aaPredicted RBP23.05■■□□□ 1.28
EPHB3-202ENST00000473079 PLPP4Q5VZY2 271 aa23.05■■□□□ 1.28
EPHB3-202ENST00000473079 NOTUMQ6P988 496 aa23.05■■□□□ 1.28
EPHB3-202ENST00000473079 TMC7Q7Z402 723 aa23.05■■□□□ 1.28
EPHB3-202ENST00000473079 SMG8Q8ND04 991 aaKnown RBP23.05■■□□□ 1.28
EPHB3-202ENST00000473079 URGCPQ8TCY9 931 aa23.05■■□□□ 1.28
EPHB3-202ENST00000473079 TMEM169Q96HH4 297 aa23.05■■□□□ 1.28
EPHB3-202ENST00000473079 TMX3Q96JJ7 454 aa23.05■■□□□ 1.28
EPHB3-202ENST00000473079 POP1Q99575 1024 aaKnown RBP23.05■■□□□ 1.28
EPHB3-202ENST00000473079 POLR3FQ9H1D9 316 aaPredicted RBP23.05■■□□□ 1.28
EPHB3-202ENST00000473079 RSAD1Q9HA92 442 aa23.05■■□□□ 1.28
EPHB3-202ENST00000473079 HIDE1A8MVS5 230 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 NT5C1B-RDH14C9J2C7 533 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 INPPL1O15357 1258 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 ZC3H11AO75152 810 aaKnown RBP eCLIP23.04■■□□□ 1.28
EPHB3-202ENST00000473079 MCM2P49736 904 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 RNASELQ05823 741 aaKnown RBP23.04■■□□□ 1.28
EPHB3-202ENST00000473079 SMC1AQ14683 1233 aaKnown RBP23.04■■□□□ 1.28
EPHB3-202ENST00000473079 HAUS3Q68CZ6 603 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 VN1R2Q8NFZ6 395 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 IGSF21Q96ID5 467 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 CSRNP2Q9H175 543 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 BARX2Q9UMQ3 279 aaPredicted RBP23.04■■□□□ 1.28
EPHB3-202ENST00000473079 INPP5FQ9Y2H2 1132 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 STK24Q9Y6E0 443 aa23.04■■□□□ 1.28
EPHB3-202ENST00000473079 LAD1O00515 517 aa23.03■■□□□ 1.28
EPHB3-202ENST00000473079 SRGAP2BP0DMP2 458 aa23.03■■□□□ 1.28
EPHB3-202ENST00000473079 PTGDRQ13258 359 aa23.03■■□□□ 1.28
EPHB3-202ENST00000473079 BMS1Q14692 1282 aaKnown RBP23.03■■□□□ 1.28
EPHB3-202ENST00000473079 POTEGQ6S5H5 508 aa23.03■■□□□ 1.28
EPHB3-202ENST00000473079 DDX53Q86TM3 631 aaKnown RBP23.03■■□□□ 1.28
EPHB3-202ENST00000473079 IGSF22Q8N9C0 903 aa23.03■■□□□ 1.28
EPHB3-202ENST00000473079 STK39Q9UEW8 545 aa23.03■■□□□ 1.28
EPHB3-202ENST00000473079 LRWD1Q9UFC0 647 aa23.03■■□□□ 1.28
EPHB3-202ENST00000473079 IPPQ9Y573 584 aa23.03■■□□□ 1.28
EPHB3-202ENST00000473079 IRAK3Q9Y616 596 aa23.03■■□□□ 1.28
EPHB3-202ENST00000473079 C2orf71A6NGG8 1288 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 ITGA4P13612 1032 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 ARF4P18085 180 aaPredicted RBP23.02■■□□□ 1.28
EPHB3-202ENST00000473079 CYP11B2P19099 503 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 NBR1Q14596 966 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 PADI6Q6TGC4 694 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 TMEM173Q86WV6 379 aaPredicted RBP23.02■■□□□ 1.28
EPHB3-202ENST00000473079 ZNF280BQ86YH2 543 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 CPB2Q96IY4 423 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 PRIMPOLQ96LW4 560 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 TMEM175Q9BSA9 504 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 EIF2AQ9BY44 585 aaKnown RBP23.02■■□□□ 1.28
EPHB3-202ENST00000473079 RAB34Q9BZG1 259 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 GPRC5CQ9NQ84 441 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 DNAJB4Q9UDY4 337 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 PCDHB6Q9Y5E3 794 aa23.02■■□□□ 1.28
EPHB3-202ENST00000473079 A0A1B0GUA9 196 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 ARHGEF35A5YM69 484 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 GPR37L1O60883 481 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 DDHD2O94830 711 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 ALDH2P05091 517 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 ALADP13716 330 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 PRPHP41219 470 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 SLC11A1P49279 550 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 AFF1P51825 1210 aaKnown RBP23.01■■□□□ 1.27
EPHB3-202ENST00000473079 RBM10P98175 930 aaKnown RBP23.01■■□□□ 1.27
EPHB3-202ENST00000473079 GIT2Q14161 759 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 CDCA2Q69YH5 1023 aaPredicted RBP23.01■■□□□ 1.27
EPHB3-202ENST00000473079 PPP4R3CPQ6ZMV5 832 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 TBC1D32Q96NH3 1257 aa23.01■■□□□ 1.27
EPHB3-202ENST00000473079 B4GALT3O60512 393 aa23■■□□□ 1.27
EPHB3-202ENST00000473079 CD2BP2O95400 341 aaKnown RBP23■■□□□ 1.27
EPHB3-202ENST00000473079 CXCL14O95715 111 aa23■■□□□ 1.27
EPHB3-202ENST00000473079 HOXB8P17481 243 aaPredicted RBP23■■□□□ 1.27
EPHB3-202ENST00000473079 CCT6AP40227 531 aaKnown RBP23■■□□□ 1.27
EPHB3-202ENST00000473079 ECM1Q16610 540 aa23■■□□□ 1.27
EPHB3-202ENST00000473079 FAM187BQ17R55 369 aa23■■□□□ 1.27
EPHB3-202ENST00000473079 MAEAQ7L5Y9 396 aa23■■□□□ 1.27
EPHB3-202ENST00000473079 VPS52Q8N1B4 723 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms