RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 KCNA1Q09470 495 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 PGM5Q15124 567 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 LACTB2Q53H82 288 aaPredicted RBP14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 CPLX4Q7Z7G2 160 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 MAGEC3Q8TD91 643 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 MAGOHBQ96A72 148 aaKnown RBP14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 FAXDC2Q96IV6 333 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 LXNQ9BS40 222 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 AP1M1Q9BXS5 423 aa14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 AGO4Q9HCK5 861 aaKnown RBP14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 MAP3K20Q9NYL2 800 aaKnown RBP14.33□□□□□ -0.12
SCAMP4-207ENST00000472442 DICER1Q9UPY3 1922 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 A0A087X0T9 212 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 RPSAP08865 295 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 FAM228BP0C875 321 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 MARSP56192 900 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 POLR2FP61218 127 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 ADAM9Q13443 819 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 PPP2R5AQ15172 486 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 KNOP1Q1ED39 458 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 NIPA1Q7RTP0 329 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 CEP72Q9P209 647 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 ADAMTS5Q9UNA0 930 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 TRAF3IP3Q9Y228 551 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 POLR2AP24928 1970 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 PPP1R12BO60237 982 aaPredicted RBP14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 NOL4O94818 638 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 PAEPP09466 180 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 MUTP22033 750 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 SLC8A1P32418 973 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 SLC18A3Q16572 532 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 EDRF1Q3B7T1 1238 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 TRIM59Q8IWR1 403 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 CCT6BQ92526 530 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 NACC1Q96RE7 527 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 LSM14BQ9BX40 385 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 ATP6V0A4Q9HBG4 840 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 LRRC4CQ9HCJ2 640 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 ADAMTS1Q9UHI8 967 aa14.32□□□□□ -0.12
SCAMP4-207ENST00000472442 COL11A1P12107 1806 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 CEP104O60308 925 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 NEBLO76041 1014 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 DDNO94850 711 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 IFFO1Q0D2I5 559 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 RAPGEF1Q13905 1077 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 PRKG1Q13976 671 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 CRYMQ14894 314 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 RPS6KA1Q15418 735 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 BMT2Q1RMZ1 405 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 TLDC1Q6P9B6 456 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 TBC1D31Q96DN5 1066 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 FIZ1Q96SL8 496 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 EDEM3Q9BZQ6 932 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 DDX47Q9H0S4 455 aaKnown RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 OLFML3Q9NRN5 406 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 SBF1O95248 1867 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 MGRN1O60291 552 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 TBCAO75347 108 aaKnown RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 DSG3P32926 999 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 SF3A3Q12874 501 aaKnown RBP eCLIP14.31□□□□□ -0.122e-7■■□□□ 14.5
SCAMP4-207ENST00000472442 KRT71Q3SY84 523 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 AGBL2Q5U5Z8 902 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 NSMFQ6X4W1 530 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 PPP4R3CPQ6ZMV5 832 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 RMDN3Q96TC7 470 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 PDCD2LQ9BRP1 358 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 IKZF4Q9H2S9 585 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 PXMP2Q9NR77 195 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 CTDP1Q9Y5B0 961 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 SART1O43290 800 aaKnown RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 ATP9AO75110 1047 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 FDX1P10109 184 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 DRD4P21917 467 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 NR2F2P24468 414 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 GBP2P32456 591 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 MTMR1Q13613 665 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 BAATQ14032 418 aaPredicted RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 ACCSLQ4AC99 568 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 ARMC9Q7Z3E5 817 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 SAMD3Q8N6K7 520 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 EIF1ADQ8N9N8 165 aaKnown RBP14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.31□□□□□ -0.125e-10■□□□□ 9.2
SCAMP4-207ENST00000472442 MDM1Q8TC05 714 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 RNF146Q9NTX7 359 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 BAIAP2L1Q9UHR4 511 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 AFG3L2Q9Y4W6 797 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 PPP2R3BQ9Y5P8 575 aa14.31□□□□□ -0.12
SCAMP4-207ENST00000472442 ASTN1O14525 1302 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 A0A1B0GUA9 196 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 DAPK3O43293 454 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 USP2O75604 605 aaPredicted RBP14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 DNAJC8O75937 253 aaPredicted RBP14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 GCNT3O95395 438 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 ATP6V1G2O95670 118 aa14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 NMT1P30419 496 aaKnown RBP14.3□□□□□ -0.12
SCAMP4-207ENST00000472442 ELF3P78545 371 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms