RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 EIF2AQ9BY44 585 aaKnown RBP11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 KCNK12Q9HB15 430 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 DZANK1Q9NVP4 752 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 MARCH5Q9NX47 278 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 KLK14Q9P0G3 267 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 DDX25Q9UHL0 483 aaKnown RBP11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 USP34Q70CQ2 3546 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 CACNA1HO95180 2353 aa11.32□□□□□ -0.6
SCAMP3-205ENST00000472397 PTPRZ1P23471 2315 aaPredicted RBP11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 IGKV6-21A0A0C4DH24 114 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 CCDC195A0A1B0GUA6 201 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 FAM205CA6NFA0 338 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 ALDH2P05091 517 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 HMGB1P09429 215 aaKnown RBP11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 IFNAR1P17181 557 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 HSPA4P34932 840 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 USP11P51784 963 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 POLGP54098 1239 aaPredicted RBP11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 CYP4A11Q02928 519 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 TDGQ13569 410 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 Q4G0T1 1027 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 MCTP2Q6DN12 878 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 ETNPPLQ8TBG4 499 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 ACSF2Q96CM8 615 aaPredicted RBP11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 PGBD4Q96DM1 585 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 DYDC2Q96IM9 177 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 MYADMQ96S97 322 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 GAD1Q99259 594 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 RNF26Q9BY78 433 aaPredicted RBP11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 SFXN1Q9H9B4 322 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 IFT122Q9HBG6 1241 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 CHST12Q9NRB3 414 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 MRPL17Q9NRX2 175 aaKnown RBP11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 COL4A3BPQ9Y5P4 624 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 R4GN57 208 aa11.31□□□□□ -0.6
SCAMP3-205ENST00000472397 KRBA1A5PL33 1030 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 INPPL1O15357 1258 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 TEX28O15482 410 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 MARCH6O60337 910 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 LRRN2O75325 713 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 DCNP07585 359 aaKnown RBP11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 ITGA4P13612 1032 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 RFX1P22670 979 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 AKAP5P24588 427 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 MLH1P40692 756 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 SCNN1GP51170 649 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 PSMC5P62195 406 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 LAMTOR4Q0VGL1 99 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 ANGPT1Q15389 498 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 XKR9Q5GH70 373 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 PLCD3Q8N3E9 789 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 DTWD2Q8NBA8 298 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 RNF149Q8NC42 400 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 SMG8Q8ND04 991 aaKnown RBP11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 NKD2Q969F2 451 aaPredicted RBP11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 ZFP42Q96MM3 310 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 INO80BQ9C086 356 aaPredicted RBP11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 USP20Q9Y2K6 914 aa11.3□□□□□ -0.6
SCAMP3-205ENST00000472397 LILRB3O75022 631 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 URODP06132 367 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 HOXA11P31270 313 aaPredicted RBP11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 NBL1P41271 181 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 QARSP47897 775 aaKnown RBP11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 RCAN1P53805 252 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 NTHL1P78549 312 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 NPY5RQ15761 445 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 B3GNT9Q6UX72 402 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 GET4Q7L5D6 327 aaPredicted RBP11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 MAEAQ7L5Y9 396 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 OTOP3Q7RTS5 596 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 ZNF410Q86VK4 478 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 HASPINQ8TF76 798 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 SMG7Q92540 1137 aaKnown RBP11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 KCNB2Q92953 911 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 IRF2BPLQ9H1B7 796 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 PIDD1Q9HB75 910 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 VAV3Q9UKW4 847 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 DUSP12Q9UNI6 340 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 COL4A3Q01955 1670 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 CFAP54Q96N23 3096 aa11.29□□□□□ -0.6
SCAMP3-205ENST00000472397 C2orf16Q68DN1 1984 aa11.28□□□□□ -0.6
SCAMP3-205ENST00000472397 CYP3A7-CYP3A51PA0A087WV96 503 aa11.28□□□□□ -0.6
SCAMP3-205ENST00000472397 PROB1E7EW31 1015 aa11.28□□□□□ -0.6
SCAMP3-205ENST00000472397 M0R2N6 131 aa11.28□□□□□ -0.6
SCAMP3-205ENST00000472397 CPLX1O14810 134 aa11.28□□□□□ -0.6
SCAMP3-205ENST00000472397 B4GALT5O43286 388 aa11.28□□□□□ -0.6
SCAMP3-205ENST00000472397 ZNF623O75123 536 aa11.28□□□□□ -0.6
SCAMP3-205ENST00000472397 SKIP12755 728 aa11.28□□□□□ -0.6
SCAMP3-205ENST00000472397 LIG1P18858 919 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms