RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 RBM5P52756 815 aaKnown RBP eCLIP8.36□□□□□ -1.07
SCAF4-205ENST00000472318 MVKQ03426 396 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 CCDC152Q4G0S7 254 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 PLEKHG4Q58EX7 1191 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 TMTC2Q8N394 836 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 C19orf47Q8N9M1 422 aaKnown RBP8.36□□□□□ -1.07
SCAF4-205ENST00000472318 PRPF38AQ8NAV1 312 aaKnown RBP8.36□□□□□ -1.07
SCAF4-205ENST00000472318 PLBD2Q8NHP8 589 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 PANK1Q8TE04 598 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 FCRL3Q96P31 734 aaPredicted RBP8.36□□□□□ -1.07
SCAF4-205ENST00000472318 KCNC2Q96PR1 638 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 PARK7Q99497 189 aaKnown RBP8.36□□□□□ -1.07
SCAF4-205ENST00000472318 TDRD3Q9H7E2 651 aaKnown RBP8.36□□□□□ -1.07
SCAF4-205ENST00000472318 PARD6AQ9NPB6 346 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 TYW1Q9NV66 732 aaKnown RBP8.36□□□□□ -1.07
SCAF4-205ENST00000472318 JAG2Q9Y219 1238 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 DDX60LQ5H9U9 1706 aaKnown RBP8.36□□□□□ -1.07
SCAF4-205ENST00000472318 ADAMTS20P59510 1910 aa8.36□□□□□ -1.07
SCAF4-205ENST00000472318 HMGCRP04035 888 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 PDGFRBP09619 1106 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 MSL3P1P0C860 447 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 PAX3P23760 479 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 GIPRP48546 466 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 PPATQ06203 517 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 TNFAIP1Q13829 316 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 PLEKHN1Q494U1 663 aaPredicted RBP8.35□□□□□ -1.07
SCAF4-205ENST00000472318 IGDCC3Q8IVU1 814 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 GPRASP2Q96D09 838 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 HAUS7Q99871 368 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 MAF1Q9H063 256 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 NOL6Q9H6R4 1146 aaKnown RBP8.35□□□□□ -1.07
SCAF4-205ENST00000472318 PHAXQ9H814 394 aaKnown RBP8.35□□□□□ -1.07
SCAF4-205ENST00000472318 CD209Q9NNX6 404 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 EFR3BQ9Y2G0 817 aa8.35□□□□□ -1.07
SCAF4-205ENST00000472318 CFAP54Q96N23 3096 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 SRGAP3O43295 1099 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 TRIM13O60858 407 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 U2AF1L5P0DN76 240 aaPredicted RBP8.34□□□□□ -1.07
SCAF4-205ENST00000472318 IFNGR1P15260 489 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 HOXA5P20719 270 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 NOP2P46087 812 aaKnown RBP8.34□□□□□ -1.07
SCAF4-205ENST00000472318 MAPKAPK2P49137 400 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 CORO7P57737 925 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 U2AF1Q01081 240 aaKnown RBP eCLIP8.34□□□□□ -1.079e-23■■■■□ 19.4
SCAF4-205ENST00000472318 CNGB1Q14028 1251 aaPredicted RBP8.34□□□□□ -1.07
SCAF4-205ENST00000472318 C4orf46Q504U0 113 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 TMEFF1Q8IYR6 380 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 RNPC3Q96LT9 517 aaKnown RBP8.34□□□□□ -1.07
SCAF4-205ENST00000472318 CRBNQ96SW2 442 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 WHRNQ9P202 907 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 PCDHA5Q9Y5H7 936 aa8.34□□□□□ -1.07
SCAF4-205ENST00000472318 SNAP23O00161 211 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 PDE8AO60658 829 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 CD3EP07766 207 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 BMP7P18075 431 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 AFF3P51826 1226 aaKnown RBP8.33□□□□□ -1.08
SCAF4-205ENST00000472318 CACNB3P54284 484 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 POU4F1Q01851 419 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 NR1I3Q14994 352 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 JAMLQ86YT9 394 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 OR6P1Q8NGX9 317 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 C20orf173Q96LM9 149 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 PTCHD1Q96NR3 888 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 KLHL25Q9H0H3 589 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 TSPYL4Q9UJ04 414 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 GJD2Q9UKL4 321 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 PNMA2Q9UL42 364 aa8.33□□□□□ -1.08
SCAF4-205ENST00000472318 NCANO14594 1321 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 DBHP09172 617 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 ATF4P18848 351 aaPredicted RBP8.32□□□□□ -1.08
SCAF4-205ENST00000472318 CTSWP56202 376 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 AMPD3Q01432 767 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 NHLH1Q02575 133 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 OS9Q13438 667 aaPredicted RBP8.32□□□□□ -1.08
SCAF4-205ENST00000472318 KRT24Q2M2I5 525 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 AKNAD1Q5T1N1 836 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 MAP3K21Q5TCX8 1036 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 RCSD1Q6JBY9 416 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 FAM129CQ86XR2 697 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 TRIB2Q92519 343 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 BADQ92934 168 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 COA7Q96BR5 231 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 ZDHHC15Q96MV8 337 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 CEP89Q96ST8 783 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 ZCCHC4Q9H5U6 513 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 TCEAL9Q9UHQ7 104 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 DIS3Q9Y2L1 958 aaKnown RBP8.32□□□□□ -1.08
SCAF4-205ENST00000472318 CHD7Q9P2D1 2997 aa8.32□□□□□ -1.08
SCAF4-205ENST00000472318 A0A1W2PQ27 194 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 A0A1W2PQ64 194 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 A0A1W2PQC6 194 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 A0A1W2PQD8 194 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 A0A1W2PQH9 124 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 CYBBP04839 570 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 HSPA5P11021 654 aaKnown RBP8.31□□□□□ -1.08
SCAF4-205ENST00000472318 EPHB4P54760 987 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 FKBP1AP62942 108 aaKnown RBP8.31□□□□□ -1.08
SCAF4-205ENST00000472318 TFF2Q03403 129 aa8.31□□□□□ -1.08
SCAF4-205ENST00000472318 SERINC3Q13530 473 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms