RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 TSPAN1O60635 241 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 EYA4O95677 639 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 EOMESO95936 686 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 HOXA11P31270 313 aaPredicted RBP16.69■□□□□ 0.26
CALD1-215ENST00000472096 PTPROQ16827 1216 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 HYIQ5T013 277 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 CDCA2Q69YH5 1023 aaPredicted RBP16.69■□□□□ 0.26
CALD1-215ENST00000472096 MAMSTRQ6ZN01 415 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 KCNK18Q7Z418 384 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 ABI1Q8IZP0 508 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 LRRC43Q8N309 656 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 P2RX5Q93086 422 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 MRPL38Q96DV4 380 aaKnown RBP16.69■□□□□ 0.26
CALD1-215ENST00000472096 AK8Q96MA6 479 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 CASD1Q96PB1 797 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 DNM3Q9UQ16 869 aa16.69■□□□□ 0.26
CALD1-215ENST00000472096 SKIP12755 728 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 AMHR2Q16671 573 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 UBXN11Q5T124 520 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 FAM173BQ6P4H8 233 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 HELQQ8TDG4 1101 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 LPPQ93052 612 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 PNMA5Q96PV4 448 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 CWH43Q9H720 699 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 TYW1Q9NV66 732 aaKnown RBP16.68■□□□□ 0.26
CALD1-215ENST00000472096 THEGQ9P2T0 379 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
CALD1-215ENST00000472096 MEIS3P2A8K0S8 358 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 GRM6O15303 877 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 ZNF623O75123 536 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 ITGB1P05556 798 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 AXLP30530 894 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 GRIN1Q05586 938 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 PTPAQ15257 358 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
CALD1-215ENST00000472096 TMEM119Q4V9L6 283 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 TIGD5Q53EQ6 642 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 NAALADL2Q58DX5 795 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 SPOUT1Q5T280 376 aaKnown RBP16.67■□□□□ 0.26
CALD1-215ENST00000472096 NOTUMQ6P988 496 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 LRRC55Q6ZSA7 311 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 CABP7Q86V35 215 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 COLGALT1Q8NBJ5 622 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 CCDC51Q96ER9 411 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 RUSC1Q9BVN2 902 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 NT5C3AQ9H0P0 336 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 LMAN2LQ9H0V9 348 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 PCDHB2Q9Y5E7 798 aa16.67■□□□□ 0.26
CALD1-215ENST00000472096 SLC26A4O43511 780 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 HSP90AA1P07900 732 aaKnown RBP16.66■□□□□ 0.26
CALD1-215ENST00000472096 ARF4P18085 180 aaPredicted RBP16.66■□□□□ 0.26
CALD1-215ENST00000472096 LAG3P18627 525 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 LONP1P36776 959 aaKnown RBP16.66■□□□□ 0.26
CALD1-215ENST00000472096 NAMPTP43490 491 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 PPP2R5AQ15172 486 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 SKIV2LQ15477 1246 aaKnown RBP16.66■□□□□ 0.26
CALD1-215ENST00000472096 LONRF3Q496Y0 759 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 ZBTB8OSQ8IWT0 167 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 KCTD17Q8N5Z5 321 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 KLHL23Q8NBE8 558 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 PTCD2Q8WV60 388 aaKnown RBP16.66■□□□□ 0.26
CALD1-215ENST00000472096 RSPH1Q8WYR4 309 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 KIFAP3Q92845 792 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 CDK5RAP3Q96JB5 506 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 MRPL9Q9BYD2 267 aaKnown RBP16.66■□□□□ 0.26
CALD1-215ENST00000472096 C2orf40Q9H1Z8 148 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 ZSCAN16Q9H4T2 348 aaPredicted RBP16.66■□□□□ 0.26
CALD1-215ENST00000472096 ALG13Q9NP73 1137 aaKnown RBP16.66■□□□□ 0.26
CALD1-215ENST00000472096 AAASQ9NRG9 546 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 PLAGL2Q9UPG8 496 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 TRIP11Q15643 1979 aa16.66■□□□□ 0.26
CALD1-215ENST00000472096 B4GALT5O43286 388 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 RINT1Q6NUQ1 792 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 MRPL10Q7Z7H8 261 aaKnown RBP16.65■□□□□ 0.26
CALD1-215ENST00000472096 DAW1Q8N136 415 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 PGBD4Q96DM1 585 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 IFT74Q96LB3 600 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 PRIMPOLQ96LW4 560 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 USP28Q96RU2 1077 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 PLIN2Q99541 437 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 KIFC3Q9BVG8 833 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 EIF2AQ9BY44 585 aaKnown RBP16.65■□□□□ 0.26
CALD1-215ENST00000472096 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 CSRNP2Q9H175 543 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 POLD4Q9HCU8 107 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 PRMT7Q9NVM4 692 aaPredicted RBP16.65■□□□□ 0.26
CALD1-215ENST00000472096 PCDHB12Q9Y5F1 795 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 CNTNAP2Q9UHC6 1331 aa16.65■□□□□ 0.26
CALD1-215ENST00000472096 TCF20Q9UGU0 1960 aaKnown RBP16.64■□□□□ 0.25
CALD1-215ENST00000472096 HIP1RO75146 1068 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 NCLP19338 710 aaKnown RBP16.64■□□□□ 0.25
CALD1-215ENST00000472096 UBA7P41226 1012 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 MAPK7Q13164 816 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 CAMK1Q14012 370 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 FAM187BQ17R55 369 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 CSPP1Q1MSJ5 1256 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 SMYD5Q6GMV2 418 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 GLB1LQ6UWU2 654 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 AGMOQ6ZNB7 445 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms