RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 POLR1AO95602 1720 aaPredicted RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 LGALS16A8MUM7 142 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 NEMP1O14524 444 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 CPP00450 1065 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 SHMT1P34896 483 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 GAS2O43903 313 aaKnown RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 MOCS2O96007 188 aaPredicted RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 CAPN2P17655 700 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 BASP1P80723 227 aaKnown RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 COG7P83436 770 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 ZNF484Q5JVG2 852 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 TADA2BQ86TJ2 420 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.13□□□□□ -0.31
IRF1-208ENST00000472045 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 CYP2C8P10632 490 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 PSMC1P62191 440 aaKnown RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 THOC5Q13769 683 aaKnown RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 TRPC7Q9HCX4 862 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 GPR182O15218 404 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 RGS16O15492 202 aaPredicted RBP13.12□□□□□ -0.31
IRF1-208ENST00000472045 SART1O43290 800 aaKnown RBP13.12□□□□□ -0.31
IRF1-208ENST00000472045 FTCDO95954 541 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 CTNNA1P35221 906 aaKnown RBP13.12□□□□□ -0.31
IRF1-208ENST00000472045 PPIL2Q13356 520 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 VGLL4Q14135 290 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 NOP9Q86U38 636 aaKnown RBP13.12□□□□□ -0.31
IRF1-208ENST00000472045 SH3TC2Q8TF17 1288 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
IRF1-208ENST00000472045 ANAPC7Q9UJX3 599 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 PCDHA13Q9Y5I0 950 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 ETF1P62495 437 aaKnown RBP13.12□□□□□ -0.31
IRF1-208ENST00000472045 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 PGRMC1O00264 195 aaKnown RBP13.12□□□□□ -0.31
IRF1-208ENST00000472045 ECEL1O95672 775 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 RPLP2P05387 115 aaKnown RBP13.12□□□□□ -0.31
IRF1-208ENST00000472045 GSTA1P08263 222 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 GSTA2P09210 222 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 ATP1A3P13637 1013 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 PDE1BQ01064 536 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 TRIM9Q9C026 710 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 IL18RAPO95256 599 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 NPTXRO95502 500 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 ALDH7A1P49419 539 aaKnown RBP13.12□□□□□ -0.31
IRF1-208ENST00000472045 NPEPPSP55786 919 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 EXOC4Q96A65 974 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 HOMER3Q9NSC5 361 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 IGSF9BQ9UPX0 1349 aa13.12□□□□□ -0.31
IRF1-208ENST00000472045 MOCS3O95396 460 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 HSPA6P17066 643 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 RPA1P27694 616 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 DNERQ8NFT8 737 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 SEPT8Q92599 483 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 TRIM56Q9BRZ2 755 aaKnown RBP13.11□□□□□ -0.31
IRF1-208ENST00000472045 UNC45AQ9H3U1 944 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 MOSPD1Q9UJG1 213 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 MSH4O15457 936 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 KCNB1Q14721 858 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 GLYCTKQ8IVS8 523 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 DCP1BQ8IZD4 617 aaKnown RBP13.11□□□□□ -0.31
IRF1-208ENST00000472045 SLC35F6Q8N357 371 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 KCTD17Q8N5Z5 321 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 TMEM169Q96HH4 297 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 TTC25Q96NG3 672 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 DDX50Q9BQ39 737 aaKnown RBP13.11□□□□□ -0.31
IRF1-208ENST00000472045 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 HMX1Q9NP08 348 aaPredicted RBP13.11□□□□□ -0.31
IRF1-208ENST00000472045 EFCAB8A8MWE9 144 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 NFIBO00712 420 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 CYBBP04839 570 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 RWDD2BP57060 319 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 NOGQ13253 232 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 DRAP1Q14919 205 aaPredicted RBP13.11□□□□□ -0.31
IRF1-208ENST00000472045 RPS6KA2Q15349 733 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 ELF2Q15723 593 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 CCDC13Q8IYE1 715 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 ACRBPQ8NEB7 543 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
IRF1-208ENST00000472045 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 LSM7Q9UK45 103 aaKnown RBP13.11□□□□□ -0.31
IRF1-208ENST00000472045 FZD1Q9UP38 647 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 JRKLQ9Y4A0 524 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 MED1Q15648 1581 aaPredicted RBP13.11□□□□□ -0.31
IRF1-208ENST00000472045 VWA5AO00534 786 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 ENC1O14682 589 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 NME3Q13232 169 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 ACCSLQ4AC99 568 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 FRMD5Q7Z6J6 570 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 CYP26B1Q9NR63 512 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 ANGPTL3Q9Y5C1 460 aa13.11□□□□□ -0.31
IRF1-208ENST00000472045 CREB3O43889 395 aa13.1□□□□□ -0.31
IRF1-208ENST00000472045 NDUFA10O95299 355 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms