RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 SRGAP1Q7Z6B7 1085 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 DAW1Q8N136 415 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 KCTD17Q8N5Z5 321 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 MCPH1Q8NEM0 835 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 EPSTI1Q96J88 318 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 PLIN2Q99541 437 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 RUSC1Q9BVN2 902 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 CCSER1Q9C0I3 900 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 POLD4Q9HCU8 107 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 BLOC1S4Q9NUP1 217 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 INSL6Q9Y581 213 aa13.74□□□□□ -0.21
LINC00888-202ENST00000471496 DENND3A2RUS2 1198 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 SMAPO00193 183 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 SLC12A3P55017 1021 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 MAPK7Q13164 816 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
LINC00888-202ENST00000471496 ZRSR1Q15695 479 aaKnown RBP13.73□□□□□ -0.21
LINC00888-202ENST00000471496 RINT1Q6NUQ1 792 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 NPAS4Q8IUM7 802 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 SYT2Q8N9I0 419 aaPredicted RBP13.73□□□□□ -0.21
LINC00888-202ENST00000471496 CDX2Q99626 313 aaPredicted RBP13.73□□□□□ -0.21
LINC00888-202ENST00000471496 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
LINC00888-202ENST00000471496 NT5C3AQ9H0P0 336 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 C1orf112Q9NSG2 853 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 AGPAT5Q9NUQ2 364 aa13.73□□□□□ -0.21
LINC00888-202ENST00000471496 PRUNE2Q8WUY3 3088 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 EPOPA6NHQ4 379 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 YEATS4O95619 227 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 ATF7P17544 494 aaPredicted RBP13.72□□□□□ -0.21
LINC00888-202ENST00000471496 SFPQP23246 707 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00888-202ENST00000471496 HOXA11P31270 313 aaPredicted RBP13.72□□□□□ -0.21
LINC00888-202ENST00000471496 DDIT3P35638 169 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 UBA7P41226 1012 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 AMHR2Q16671 573 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 FOXD4L6Q3SYB3 417 aaPredicted RBP13.72□□□□□ -0.21
LINC00888-202ENST00000471496 FAM102BQ5T8I3 360 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
LINC00888-202ENST00000471496 FOXD4L3Q6VB84 417 aaPredicted RBP13.72□□□□□ -0.21
LINC00888-202ENST00000471496 ZNF396Q96N95 335 aaPredicted RBP13.72□□□□□ -0.21
LINC00888-202ENST00000471496 TRAIPQ9BWF2 469 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 RNF19AQ9NV58 838 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 ATG2AQ2TAZ0 1938 aa13.72□□□□□ -0.21
LINC00888-202ENST00000471496 PLA2G4BP0C869 781 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 PLCG1P19174 1290 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 PHKA2P46019 1235 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 GATMP50440 423 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 TFDP1Q14186 410 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 BECN1Q14457 450 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 ARSHQ5FYA8 562 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 SMYD5Q6GMV2 418 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 CATSPER4Q7RTX7 472 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 ZNF598Q86UK7 904 aaKnown RBP13.71□□□□□ -0.21
LINC00888-202ENST00000471496 ECHDC2Q86YB7 292 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 KRI1Q8N9T8 703 aaKnown RBP13.71□□□□□ -0.21
LINC00888-202ENST00000471496 MYLIPQ8WY64 445 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 SYMPKQ92797 1274 aaKnown RBP13.71□□□□□ -0.21
LINC00888-202ENST00000471496 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 YME1L1Q96TA2 773 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 PRDM12Q9H4Q4 367 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 ELAC1Q9H777 363 aaKnown RBP13.71□□□□□ -0.21
LINC00888-202ENST00000471496 CERS4Q9HA82 394 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 CHST12Q9NRB3 414 aa13.71□□□□□ -0.21
LINC00888-202ENST00000471496 ADGRA3Q8IWK6 1321 aa13.71□□□□□ -0.22
LINC00888-202ENST00000471496 A0A087X0B3 334 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 A0A0U1RQF3 1178 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 SPTLC2O15270 562 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 TSPAN1O60635 241 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 PPP6R2O75170 966 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 ZSCAN20P17040 1043 aaPredicted RBP13.7□□□□□ -0.22
LINC00888-202ENST00000471496 GUCY2CP25092 1073 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 ERVK-21P61565 698 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 DNM1Q05193 864 aaKnown RBP13.7□□□□□ -0.22
LINC00888-202ENST00000471496 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 STK38Q15208 465 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 UBXN11Q5T124 520 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 CALML4Q96GE6 196 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 C17orf80Q9BSJ5 609 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 TMEM161AQ9NX61 479 aa13.7□□□□□ -0.22
LINC00888-202ENST00000471496 DAXXQ9UER7 740 aaPredicted RBP13.7□□□□□ -0.22
LINC00888-202ENST00000471496 PIN4Q9Y237 131 aaKnown RBP13.7□□□□□ -0.22
LINC00888-202ENST00000471496 LRRIQ4A6NIV6 560 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 INO80B-WBP1J3KQ70 363 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 RFXAPO00287 272 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 B4GALT5O43286 388 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 HIP1RO75146 1068 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 EDN1P05305 212 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 STAG3L1P0CL83 205 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 FGFR1P11362 822 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 NAMPTP43490 491 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
LINC00888-202ENST00000471496 ATL3Q6DD88 541 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 RAD54LQ92698 747 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 KIFAP3Q92845 792 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 CDK5RAP3Q96JB5 506 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 KIFC3Q9BVG8 833 aa13.69□□□□□ -0.22
LINC00888-202ENST00000471496 CCDC113Q9H0I3 377 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms