RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 CIITAP33076 1130 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 RAB27AP51159 221 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 GPC3P51654 580 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 FOXK2Q01167 660 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 BMP2KLQ5H9B9 411 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 ATAT1Q5SQI0 421 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 KIAA1841Q6NSI8 718 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 ELMSAN1Q6PJG2 1045 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 GLB1LQ6UWU2 654 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 LRRC55Q6ZSA7 311 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 LRRC71Q8N4P6 559 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 LINC01465Q8N7H1 131 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 RDM1Q8NG50 284 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 HELQQ8TDG4 1101 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 TCEANC2Q96MN5 208 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 USB1Q9BQ65 265 aaKnown RBP10.27□□□□□ -0.77
CPSF4-211ENST00000471455 JPH2Q9BR39 696 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-211ENST00000471455 TEKT3Q9BXF9 490 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 MFSD1Q9H3U5 465 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 DISC1Q9NRI5 854 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 USTQ9Y2C2 406 aa10.27□□□□□ -0.77
CPSF4-211ENST00000471455 ZFHX2Q9C0A1 2572 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-211ENST00000471455 RIF1Q5UIP0 2472 aaKnown RBP10.26□□□□□ -0.77
CPSF4-211ENST00000471455 C5orf42Q9H799 3197 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 PROB1E7EW31 1015 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 CLASP2O75122 1294 aaKnown RBP10.26□□□□□ -0.77
CPSF4-211ENST00000471455 ZC3H11AO75152 810 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPSF4-211ENST00000471455 PBX3P40426 434 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 BCAR1P56945 870 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 RNASELQ05823 741 aaKnown RBP10.26□□□□□ -0.77
CPSF4-211ENST00000471455 COL9A3Q14050 684 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-211ENST00000471455 CLLU1OSQ5K130 101 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 LRCH2Q5VUJ6 765 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 ZNF598Q86UK7 904 aaKnown RBP10.26□□□□□ -0.77
CPSF4-211ENST00000471455 ZNF410Q86VK4 478 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 ZDHHC14Q8IZN3 488 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 ACSF2Q96CM8 615 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-211ENST00000471455 TRAIPQ9BWF2 469 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 POMKQ9H5K3 350 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 SFXN1Q9H9B4 322 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 RNF19AQ9NV58 838 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 FAM86C1Q9NVL1 165 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 DBR1Q9UK59 544 aaKnown RBP10.26□□□□□ -0.77
CPSF4-211ENST00000471455 IRAK3Q9Y616 596 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 NID2Q14112 1375 aa10.26□□□□□ -0.77
CPSF4-211ENST00000471455 FAM186AA6NE01 2351 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 C2CD4DB7Z1M9 353 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 PRPF3O43395 683 aaKnown RBP10.25□□□□□ -0.77
CPSF4-211ENST00000471455 CHMP2AO43633 222 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 CXCL14O95715 111 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 CTSAP10619 480 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 CDC27P30260 824 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 SLC19A1P41440 591 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 PHKA2P46019 1235 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 USP11P51784 963 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 XKR3Q5GH77 459 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 RARS2Q5T160 578 aaKnown RBP10.25□□□□□ -0.77
CPSF4-211ENST00000471455 TWF2Q6IBS0 349 aaKnown RBP10.25□□□□□ -0.77
CPSF4-211ENST00000471455 CCDC149Q6ZUS6 474 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 OTOP3Q7RTS5 596 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 DDX53Q86TM3 631 aaKnown RBP10.25□□□□□ -0.77
CPSF4-211ENST00000471455 CABP7Q86V35 215 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 VPS52Q8N1B4 723 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 URGCPQ8TCY9 931 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 PGBD4Q96DM1 585 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 CCDC136Q96JN2 1154 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 EMILIN2Q9BXX0 1053 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 RNF26Q9BY78 433 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-211ENST00000471455 IRX2Q9BZI1 471 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-211ENST00000471455 ZBP1Q9H171 429 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 DPP7Q9UHL4 492 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 TRIOO75962 3097 aa10.25□□□□□ -0.77
CPSF4-211ENST00000471455 H0Y858 1186 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 SPTLC1O15269 473 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 MSH4O15457 936 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 ZNF862O60290 1169 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 DKC1O60832 514 aaKnown RBP eCLIP10.24□□□□□ -0.77
CPSF4-211ENST00000471455 CDC45O75419 566 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 BRD1O95696 1058 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 ADD1P35611 737 aaKnown RBP10.24□□□□□ -0.77
CPSF4-211ENST00000471455 CLCN5P51795 746 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 NOMO2Q5JPE7 1267 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 BLOC1S2Q6QNY1 142 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 MIER3Q7Z3K6 550 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 EXOC8Q8IYI6 725 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 TRIM22Q8IYM9 498 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 SLC5A5Q92911 643 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 LENG9Q96B70 501 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 IGSF21Q96ID5 467 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 NIFKQ9BYG3 293 aaKnown RBP10.24□□□□□ -0.77
CPSF4-211ENST00000471455 SH3GLB2Q9NR46 395 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 CYP26B1Q9NR63 512 aa10.24□□□□□ -0.77
CPSF4-211ENST00000471455 PIN4Q9Y237 131 aaKnown RBP10.24□□□□□ -0.77
CPSF4-211ENST00000471455 WDFY4Q6ZS81 3184 aa10.23□□□□□ -0.77
CPSF4-211ENST00000471455 PDGFBP01127 241 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-211ENST00000471455 NBL1P41271 181 aa10.23□□□□□ -0.77
CPSF4-211ENST00000471455 NONOQ15233 471 aaKnown RBP eCLIP10.23□□□□□ -0.77
CPSF4-211ENST00000471455 TARBP2Q15633 366 aaKnown RBP10.23□□□□□ -0.77
CPSF4-211ENST00000471455 ADCK5Q3MIX3 580 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms