RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PEX11BO96011 259 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 WNT3AP56704 352 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 SESN3P58005 492 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 MEF2AQ02078 507 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-202ENST00000471307 HTR3DQ70Z44 454 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 TAS1R1Q7RTX1 841 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 APBB1IPQ7Z5R6 666 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-202ENST00000471307 PIK3C3Q8NEB9 887 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 OR14C36Q8NHC7 312 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 SORCS2Q96PQ0 1159 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 FDXACB1Q9BRP7 624 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-202ENST00000471307 ENKD1Q9H0I2 346 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 CSRNP2Q9H175 543 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 MS4A5Q9H3V2 200 aa7.82□□□□□ -1.16
CCDC39-202ENST00000471307 SHROOM4Q9ULL8 1493 aa7.81□□□□□ -1.16
CCDC39-202ENST00000471307 MAN2A2P49641 1150 aa7.81□□□□□ -1.16
CCDC39-202ENST00000471307 PPARAQ07869 468 aa7.81□□□□□ -1.16
CCDC39-202ENST00000471307 LSM12Q3MHD2 195 aaKnown RBP7.81□□□□□ -1.16
CCDC39-202ENST00000471307 SLC41A1Q8IVJ1 513 aa7.81□□□□□ -1.16
CCDC39-202ENST00000471307 PAWRQ96IZ0 340 aaKnown RBP7.81□□□□□ -1.16
CCDC39-202ENST00000471307 SCAND2PQ9GZW5 306 aaPredicted RBP7.81□□□□□ -1.16
CCDC39-202ENST00000471307 ING3Q9NXR8 418 aa7.81□□□□□ -1.16
CCDC39-202ENST00000471307 CEP72Q9P209 647 aa7.81□□□□□ -1.16
CCDC39-202ENST00000471307 NCDNQ9UBB6 729 aa7.81□□□□□ -1.16
CCDC39-202ENST00000471307 SCRIBQ14160 1630 aa7.81□□□□□ -1.16
CCDC39-202ENST00000471307 A0A1W2PR48 441 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 LCHNA4D1U4 455 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 GOLGA6L6A8MZA4 724 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 NPIPB8E9PQR5 432 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 NEMP1O14524 444 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 BRINP1O60477 761 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 C1SP09871 688 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 GNAT2P19087 354 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 ABHD18Q0P651 414 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 TUBA3CQ13748 450 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
CCDC39-202ENST00000471307 DCAF17Q5H9S7 520 aaPredicted RBP7.8□□□□□ -1.16
CCDC39-202ENST00000471307 TUBA3EQ6PEY2 450 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 MDGA1Q8NFP4 955 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 CHAC2Q8WUX2 184 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 ACAP3Q96P50 834 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 PDCD2LQ9BRP1 358 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 ANO3Q9BYT9 981 aa7.8□□□□□ -1.16
CCDC39-202ENST00000471307 ZNF202O95125 648 aa7.79□□□□□ -1.16
CCDC39-202ENST00000471307 MCM7P33993 719 aa7.79□□□□□ -1.16
CCDC39-202ENST00000471307 METTL24Q5JXM2 366 aa7.79□□□□□ -1.16
CCDC39-202ENST00000471307 NAIF1Q69YI7 327 aaPredicted RBP7.79□□□□□ -1.16
CCDC39-202ENST00000471307 LYSMD2Q8IV50 215 aa7.79□□□□□ -1.16
CCDC39-202ENST00000471307 ST8SIA2Q92186 375 aa7.79□□□□□ -1.16
CCDC39-202ENST00000471307 GPR87Q9BY21 358 aa7.79□□□□□ -1.16
CCDC39-202ENST00000471307 EVLQ9UI08 416 aaPredicted RBP7.79□□□□□ -1.16
CCDC39-202ENST00000471307 HS3ST3A1Q9Y663 406 aa7.79□□□□□ -1.16
CCDC39-202ENST00000471307 NARSO43776 548 aaKnown RBP7.78□□□□□ -1.16
CCDC39-202ENST00000471307 SCNN1GP51170 649 aa7.78□□□□□ -1.16
CCDC39-202ENST00000471307 RABGGTBP53611 331 aa7.78□□□□□ -1.16
CCDC39-202ENST00000471307 MGAT5Q09328 741 aa7.78□□□□□ -1.16
CCDC39-202ENST00000471307 STRN3Q13033 797 aa7.78□□□□□ -1.16
CCDC39-202ENST00000471307 FSCN1Q16658 493 aaKnown RBP7.78□□□□□ -1.16
CCDC39-202ENST00000471307 CCDC62Q6P9F0 684 aa7.78□□□□□ -1.16
CCDC39-202ENST00000471307 Q6ZRM9 215 aa7.78□□□□□ -1.16
CCDC39-202ENST00000471307 PCED1AQ9H1Q7 454 aa7.78□□□□□ -1.16
CCDC39-202ENST00000471307 CDY2AQ9Y6F7 541 aa7.78□□□□□ -1.16
CCDC39-202ENST00000471307 XDHP47989 1333 aa7.78□□□□□ -1.16
CCDC39-202ENST00000471307 KLRG2A4D1S0 409 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-202ENST00000471307 HOXA3O43365 443 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-202ENST00000471307 LTA4HP09960 611 aaKnown RBP7.77□□□□□ -1.17
CCDC39-202ENST00000471307 GYPEP15421 78 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 CPEP16870 476 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 MASP1P48740 699 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 FAPQ12884 760 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 C19orf54Q5BKX5 351 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 PITRM1Q5JRX3 1037 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 HDGFL2Q7Z4V5 671 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-202ENST00000471307 ELOA2Q8IYF1 753 aaPredicted RBP7.77□□□□□ -1.17
CCDC39-202ENST00000471307 AFAP1L2Q8N4X5 818 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 AMER2Q8N7J2 671 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 CLRN3Q8NCR9 226 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 ATXN2LQ8WWM7 1075 aaKnown RBP7.77□□□□□ -1.17
CCDC39-202ENST00000471307 UNC13AQ9UPW8 1703 aa7.77□□□□□ -1.17
CCDC39-202ENST00000471307 SLPIP03973 132 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 CLEC2LP0C7M8 214 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 DGCR2P98153 550 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 DUSP2Q05923 314 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 TRIM25Q14258 630 aaKnown RBP7.76□□□□□ -1.17
CCDC39-202ENST00000471307 PDCD1Q15116 288 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 CT47A1Q5JQC4 288 aaPredicted RBP7.76□□□□□ -1.17
CCDC39-202ENST00000471307 OR5M3Q8NGP4 307 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 IL17RAQ96F46 866 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 RAX2Q96IS3 184 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 MNTQ99583 582 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 KCTD10Q9H3F6 313 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 TOPORSQ9NS56 1045 aaPredicted RBP7.76□□□□□ -1.17
CCDC39-202ENST00000471307 PRKAB1Q9Y478 270 aa7.76□□□□□ -1.17
CCDC39-202ENST00000471307 VIL1P09327 827 aaKnown RBP7.75□□□□□ -1.17
CCDC39-202ENST00000471307 MAKP20794 623 aa7.75□□□□□ -1.17
CCDC39-202ENST00000471307 ENPP1P22413 925 aa7.75□□□□□ -1.17
CCDC39-202ENST00000471307 ID4P47928 161 aa7.75□□□□□ -1.17
CCDC39-202ENST00000471307 MRPL49Q13405 166 aaKnown RBP7.75□□□□□ -1.17
CCDC39-202ENST00000471307 TOB2Q14106 344 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-202ENST00000471307 UGT8Q16880 541 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms