RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 HIST1H2AHQ96KK5 128 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 PLEKHG4BQ96PX9 1271 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 UIMC1Q96RL1 719 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 MPHOSPH9Q99550 1183 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 HIST1H2AJQ99878 128 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 TCF25Q9BQ70 676 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 SOX7Q9BT81 388 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 SPTLC3Q9NUV7 552 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.1□□□□□ -2.07
UBXN4-207ENST00000471246 AURKAIP1Q9NWT8 199 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-207ENST00000471246 NCDNQ9UBB6 729 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 MSRAQ9UJ68 235 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 SYNPO2Q9UMS6 1093 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 TBX22Q9Y458 520 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 PPP2R3BQ9Y5P8 575 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 MYPNQ86TC9 1320 aa2.1□□□□□ -2.07
UBXN4-207ENST00000471246 A0A087X0B3 334 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 CYSRT1A8MQ03 144 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 MASP2O00187 686 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 NRP1O14786 923 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 DAPK3O43293 454 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 KDM1AO60341 852 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 STC2O76061 302 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 SEC24DO94855 1032 aaPredicted RBP2.09□□□□□ -2.07
UBXN4-207ENST00000471246 FSBPO95073 299 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 FKBP9O95302 570 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 GAAP10253 952 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 MYCLP1P12525 358 aaPredicted RBP2.09□□□□□ -2.07
UBXN4-207ENST00000471246 LSP1P33241 339 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 KIR2DL3P43628 341 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 MAN2A2P49641 1150 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 SCNN1BP51168 640 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 SCNN1GP51170 649 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 MANFP55145 182 aaKnown RBP2.09□□□□□ -2.07
UBXN4-207ENST00000471246 C21orf58P58505 322 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 PPARAQ07869 468 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 SPIDRQ14159 915 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 TERF2Q15554 542 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 DDB1Q16531 1140 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 MAN2A1Q16706 1144 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 FAM214AQ32MH5 1076 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 PLEKHG4Q58EX7 1191 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 FKBP15Q5T1M5 1219 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 FNDC7Q5VTL7 733 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 FAM111BQ6SJ93 734 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 FKBP9P1Q75LS8 142 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 C11orf74Q86VG3 221 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 CXorf67Q86X51 503 aaPredicted RBP2.09□□□□□ -2.07
UBXN4-207ENST00000471246 TMPRSS6Q8IU80 811 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 PPP1R14CQ8TAE6 165 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 LEO1Q8WVC0 666 aaPredicted RBP2.09□□□□□ -2.07
UBXN4-207ENST00000471246 SLC5A5Q92911 643 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 ARL8AQ96BM9 186 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 ZNF496Q96IT1 587 aaPredicted RBP2.09□□□□□ -2.07
UBXN4-207ENST00000471246 FDXACB1Q9BRP7 624 aaPredicted RBP2.09□□□□□ -2.07
UBXN4-207ENST00000471246 OSBPL6Q9BZF3 934 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 EMC7Q9NPA0 242 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 CEP72Q9P209 647 aa2.09□□□□□ -2.07
UBXN4-207ENST00000471246 PRSS38A1L453 326 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 KLRG2A4D1S0 409 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 NRP2O60462 931 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ALDH1A2O94788 518 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 IPO13O94829 963 aaKnown RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 LY86O95711 162 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 CFBP00751 764 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ADH4P08319 380 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 CLEC2LP0C7M8 214 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 BPIP17213 487 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 KRT4P19013 534 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ADRA1BP35368 520 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 GPR15P49685 360 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 RABGGTBP53611 331 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 NPEPPSP55786 919 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 CD69Q07108 199 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 MGAT5Q09328 741 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 TUBA3CQ13748 450 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 CNGB1Q14028 1251 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 TRIM25Q14258 630 aaKnown RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 TAF7LQ5H9L4 462 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 BROXQ5VW32 411 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 C1QL3Q5VWW1 255 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 MFSD5Q6N075 450 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 CCDC62Q6P9F0 684 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 TUBA3EQ6PEY2 450 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 LMBR1LQ6UX01 489 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 HTR3DQ70Z44 454 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 GRASPQ7Z6J2 395 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 RNF180Q86T96 592 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 NOP9Q86U38 636 aaKnown RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 THNSL2Q86YJ6 484 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 GLB1L2Q8IW92 636 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ELOA2Q8IYF1 753 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 CMTM4Q8IZR5 234 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 THEMISQ8N1K5 641 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 MSL3Q8N5Y2 521 aaKnown RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 MDGA1Q8NFP4 955 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ZNF483Q8TF39 744 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 ATXN2LQ8WWM7 1075 aaKnown RBP2.08□□□□□ -2.08
UBXN4-207ENST00000471246 GAB3Q8WWW8 586 aa2.08□□□□□ -2.08
UBXN4-207ENST00000471246 WASF1Q92558 559 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms