RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 FAM161BQ96MY7 647 aa21.8■■□□□ 1.08
HDAC7-220ENST00000471235 FZD8Q9H461 694 aa21.8■■□□□ 1.08
HDAC7-220ENST00000471235 FAM105AQ9NUU6 356 aa21.8■■□□□ 1.08
HDAC7-220ENST00000471235 RNF19AQ9NV58 838 aa21.8■■□□□ 1.08
HDAC7-220ENST00000471235 FAM13BQ9NYF5 915 aa21.8■■□□□ 1.08
HDAC7-220ENST00000471235 ARHGAP28Q9P2N2 729 aa21.8■■□□□ 1.08
HDAC7-220ENST00000471235 PCDHB7Q9Y5E2 793 aa21.8■■□□□ 1.08
HDAC7-220ENST00000471235 CHD7Q9P2D1 2997 aa21.79■■□□□ 1.08
HDAC7-220ENST00000471235 ZNF131P52739 623 aa21.79■■□□□ 1.08
HDAC7-220ENST00000471235 MAPK6Q16659 721 aa21.79■■□□□ 1.08
HDAC7-220ENST00000471235 NOTUMQ6P988 496 aa21.79■■□□□ 1.08
HDAC7-220ENST00000471235 SV2BQ7L1I2 683 aa21.79■■□□□ 1.08
HDAC7-220ENST00000471235 CCDC51Q96ER9 411 aa21.79■■□□□ 1.08
HDAC7-220ENST00000471235 SEMA6BQ9H3T3 888 aa21.79■■□□□ 1.08
HDAC7-220ENST00000471235 KMT5AQ9NQR1 393 aa21.79■■□□□ 1.08
HDAC7-220ENST00000471235 RNF216Q9NWF9 866 aaPredicted RBP21.79■■□□□ 1.08
HDAC7-220ENST00000471235 MYMKA6NI61 221 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 TTLL13PA6NNM8 815 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 SLC16A4O15374 487 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 TBCAO75347 108 aaKnown RBP21.78■■□□□ 1.08
HDAC7-220ENST00000471235 FAM13AO94988 1023 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 FGFR1P11362 822 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 LIG1P18858 919 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 RAB27AP51159 221 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 EFNA5P52803 228 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 ADALQ6DHV7 355 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 RNF169Q8NCN4 708 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 SPIRE2Q8WWL2 714 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 TSHZ2Q9NRE2 1034 aa21.78■■□□□ 1.08
HDAC7-220ENST00000471235 POLR2DO15514 142 aaKnown RBP21.77■■□□□ 1.08
HDAC7-220ENST00000471235 PAN2Q504Q3 1202 aaKnown RBP21.77■■□□□ 1.08
HDAC7-220ENST00000471235 DYMQ7RTS9 669 aa21.77■■□□□ 1.08
HDAC7-220ENST00000471235 TAS1R3Q7RTX0 852 aa21.77■■□□□ 1.08
HDAC7-220ENST00000471235 CMTR2Q8IYT2 770 aaKnown RBP21.77■■□□□ 1.08
HDAC7-220ENST00000471235 IQUBQ8NA54 791 aa21.77■■□□□ 1.08
HDAC7-220ENST00000471235 DDX12PQ92771 950 aa21.77■■□□□ 1.08
HDAC7-220ENST00000471235 EIF2AQ9BY44 585 aaKnown RBP21.77■■□□□ 1.08
HDAC7-220ENST00000471235 CUEDC2Q9H467 287 aa21.77■■□□□ 1.08
HDAC7-220ENST00000471235 PARVGQ9HBI0 331 aa21.77■■□□□ 1.08
HDAC7-220ENST00000471235 MTMR10Q9NXD2 777 aa21.77■■□□□ 1.08
HDAC7-220ENST00000471235 LARSQ9P2J5 1176 aaKnown RBP21.77■■□□□ 1.08
HDAC7-220ENST00000471235 USP20Q9Y2K6 914 aa21.77■■□□□ 1.08
HDAC7-220ENST00000471235 ACKR2O00590 384 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 EOMESO95936 686 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 SKIP12755 728 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 PFKFB1P16118 471 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 CMA1P23946 247 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 NCKAP1LP55160 1127 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 NCBP1Q09161 790 aaKnown RBP21.76■■□□□ 1.07
HDAC7-220ENST00000471235 PRPF4BQ13523 1007 aaKnown RBP21.76■■□□□ 1.07
HDAC7-220ENST00000471235 BTG3Q14201 252 aaPredicted RBP21.76■■□□□ 1.07
HDAC7-220ENST00000471235 GRIN2CQ14957 1233 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 CLLU1OSQ5K130 101 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 CDR2LQ86X02 465 aaPredicted RBP21.76■■□□□ 1.07
HDAC7-220ENST00000471235 TMEM161BQ8NDZ6 487 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 DNAJC19Q96DA6 116 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 GUCD1Q96NT3 240 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 NTPCRQ9BSD7 190 aaKnown RBP21.76■■□□□ 1.07
HDAC7-220ENST00000471235 TNMDQ9H2S6 317 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 PDZD7Q9H5P4 517 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 TMEM134Q9H6X4 195 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 CHMP5Q9NZZ3 219 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 KCNH3Q9ULD8 1083 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 RBM19Q9Y4C8 960 aaKnown RBP21.76■■□□□ 1.07
HDAC7-220ENST00000471235 PCDHB2Q9Y5E7 798 aa21.76■■□□□ 1.07
HDAC7-220ENST00000471235 A0A1B0GUA9 196 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 A0A1B0GVL5 298 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 TBKBP1A7MCY6 615 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 K7ERI5 159 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 ZNF623O75123 536 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 LINC00271P0C7V0 271 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 NT5DC1Q5TFE4 455 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 SLC27A1Q6PCB7 646 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 FIBCD1Q8N539 461 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 MYCT1Q8N699 235 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 STAMQ92783 540 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 LPPQ93052 612 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 TGS1Q96RS0 853 aaKnown RBP21.75■■□□□ 1.07
HDAC7-220ENST00000471235 ZHX3Q9H4I2 956 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 CERS4Q9HA82 394 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 KBTBD4Q9NVX7 518 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 HPSEQ9Y251 543 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 MRPL42Q9Y6G3 142 aaKnown RBP21.75■■□□□ 1.07
HDAC7-220ENST00000471235 ANK1P16157 1881 aa21.75■■□□□ 1.07
HDAC7-220ENST00000471235 CDH23Q9H251 3354 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 A0A1W2PQ27 194 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 A0A1W2PQ64 194 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 A0A1W2PQD8 194 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 EPOPA6NHQ4 379 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 MEIS3P2A8K0S8 358 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 K7ENM7 598 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 N4BP3O15049 544 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 HOXA2O43364 376 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 NPTXRO95502 500 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 MAPTP10636 758 aaKnown RBP21.74■■□□□ 1.07
HDAC7-220ENST00000471235 SMTNP53814 917 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 ERVK-21P61565 698 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 TMEM132AQ24JP5 1023 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 LONRF3Q496Y0 759 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 MRPL10Q7Z7H8 261 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms