RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 SH3TC1Q8TE82 1336 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 KIF14Q15058 1648 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 RGS5O15539 181 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 CDC40O60508 579 aaKnown RBP eCLIP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 GYS1P13807 737 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 YWHAZP63104 245 aaKnown RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 PLIN5Q00G26 463 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 NFX1Q12986 1120 aaKnown RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 CUL4AQ13619 759 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 ABCB5Q2M3G0 1257 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 CHSY1Q86X52 802 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 ZNF496Q96IT1 587 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-210ENST00000471181 FAM81BQ96LP2 452 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 MYLK2Q9H1R3 596 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 PCDHA13Q9Y5I0 950 aa7.3□□□□□ -1.24
BRCA1-210ENST00000471181 IQCA1LA6NCM1 817 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 EIF3BP55884 814 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 KRT76Q01546 638 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 BTKQ06187 659 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 KLHL38Q2WGJ6 581 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 C6orf10Q5SRN2 563 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ICE2Q659A1 982 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ANKS6Q68DC2 871 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 POMGNT2Q8NAT1 580 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 URGCPQ8TCY9 931 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 CEP95Q96GE4 821 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 NARS2Q96I59 477 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ACAP3Q96P50 834 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 TGS1Q96RS0 853 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 KIF2CQ99661 725 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 REXO4Q9GZR2 422 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 SPTLC3Q9NUV7 552 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 RHBDL2Q9NX52 303 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 CLRN2A0PK11 232 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ENO4A6NNW6 628 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ENO1P06733 434 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ATP6V1C1P21283 382 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 AKT1P31749 480 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 BTDP43251 543 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 PLOD1Q02809 727 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 KCTD1Q719H9 257 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 COMMD2Q86X83 199 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 SMYD4Q8IYR2 804 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 GALNT4Q8N4A0 578 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 TBC1D22AQ8WUA7 517 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ZNF274Q96GC6 653 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 LBHD1Q9BQE6 289 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 TMEM206Q9H813 350 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 NHEJ1Q9H9Q4 299 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 SCN3BQ9NY72 215 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 STON1Q9Y6Q2 735 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 FAM135AQ9P2D6 1515 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ADGRA2Q96PE1 1338 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 TBC1D12O60347 775 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 SRP72O76094 671 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 PUDPQ08623 228 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 NFIL3Q16649 462 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 CAPRIN2Q6IMN6 1127 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 CATSPER1Q8NEC5 780 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 TRIM63Q969Q1 353 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 GCOM2Q9BZD3 368 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ALG13Q9NP73 1137 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 COPRSQ9NQ92 184 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ARIH1Q9Y4X5 557 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 FRMPD1Q5SYB0 1578 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 MROH5Q6ZUA9 1318 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 USP17L12C9JPN9 530 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 USP17L21D6R901 530 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 CHUKO15111 745 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 SERPINB3P29508 390 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 EIF4A3P38919 411 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 BNIPLQ7Z465 357 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 SDR42E1Q8WUS8 393 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 FOPNLQ96NB1 174 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 HSPBP1Q9NZL4 362 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 PCDHGA3Q9Y5H0 932 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 FGGP02679 453 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 HIST1H2AGP0C0S8 130 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 HIST1H2ADP20671 130 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ABCE1P61221 599 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ETF1P62495 437 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 HIC1Q14526 733 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 PHKG1Q16816 387 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 C8orf34Q49A92 452 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 SARM1Q6SZW1 724 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ZBED8Q8IZ13 594 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 PNMA1Q8ND90 353 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 HIST1H2AHQ96KK5 128 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 HIST1H2AJQ99878 128 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 H2AFJQ9BTM1 129 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 CARD9Q9H257 536 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 DHX36Q9H2U1 1008 aaKnown RBP7.29□□□□□ -1.24
BRCA1-210ENST00000471181 GID8Q9NWU2 228 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 SYBUQ9NX95 663 aa7.29□□□□□ -1.24
BRCA1-210ENST00000471181 ABCC10Q5T3U5 1492 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 SOWAHDA6NJG2 315 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 TLR2O60603 784 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ARF4P18085 180 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-210ENST00000471181 GYS2P54840 703 aa7.28□□□□□ -1.24
BRCA1-210ENST00000471181 ZNF235Q14590 738 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms