RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 MB21D2Q8IYB1 491 aaPredicted RBP10□□□□□ -0.81
XRN1-208ENST00000470537 VPS52Q8N1B4 723 aa10□□□□□ -0.81
XRN1-208ENST00000470537 SLC39A11Q8N1S5 342 aa10□□□□□ -0.81
XRN1-208ENST00000470537 CCDC82Q8N4S0 544 aa10□□□□□ -0.81
XRN1-208ENST00000470537 RNF169Q8NCN4 708 aa10□□□□□ -0.81
XRN1-208ENST00000470537 CYP2W1Q8TAV3 490 aa10□□□□□ -0.81
XRN1-208ENST00000470537 TMEM40Q8WWA1 233 aa10□□□□□ -0.81
XRN1-208ENST00000470537 STAMQ92783 540 aa10□□□□□ -0.81
XRN1-208ENST00000470537 MAP4K1Q92918 833 aa10□□□□□ -0.81
XRN1-208ENST00000470537 NXPE3Q969Y0 559 aa10□□□□□ -0.81
XRN1-208ENST00000470537 SCLT1Q96NL6 688 aa10□□□□□ -0.81
XRN1-208ENST00000470537 MYL10Q9BUA6 226 aa10□□□□□ -0.81
XRN1-208ENST00000470537 EMILIN2Q9BXX0 1053 aa10□□□□□ -0.81
XRN1-208ENST00000470537 INO80BQ9C086 356 aaPredicted RBP10□□□□□ -0.81
XRN1-208ENST00000470537 SFXN1Q9H9B4 322 aa10□□□□□ -0.81
XRN1-208ENST00000470537 CHST12Q9NRB3 414 aa10□□□□□ -0.81
XRN1-208ENST00000470537 PCDHA10Q9Y5I2 948 aa10□□□□□ -0.81
XRN1-208ENST00000470537 MAFBQ9Y5Q3 323 aaPredicted RBP10□□□□□ -0.81
XRN1-208ENST00000470537 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.99□□□□□ -0.81
XRN1-208ENST00000470537 PLEKHA8P1O95397 391 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 C22orf31O95567 290 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 VTNP04004 478 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 CTSAP10619 480 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 SREBF1P36956 1147 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 DNM2P50570 870 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 BCAR1P56945 870 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 SETQ01105 290 aaPredicted RBP9.99□□□□□ -0.81
XRN1-208ENST00000470537 PTH1RQ03431 593 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 ITGB3BPQ13352 177 aaPredicted RBP9.99□□□□□ -0.81
XRN1-208ENST00000470537 ANGPT1Q15389 498 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 PTPRNQ16849 979 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 LINC01559Q495D7 138 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 EFCAB12Q6NXP0 572 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 C15orf39Q6ZRI6 1047 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 TMTC3Q6ZXV5 915 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 DDX53Q86TM3 631 aaKnown RBP9.99□□□□□ -0.81
XRN1-208ENST00000470537 PLA2G4DQ86XP0 818 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 CCDC105Q8IYK2 499 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 DTWD2Q8NBA8 298 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 IRF7Q92985 503 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 ZNF577Q9BSK1 485 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 ANO3Q9BYT9 981 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 WNT16Q9UBV4 365 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 SSX2IPQ9Y2D8 614 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 SAMM50Q9Y512 469 aa9.99□□□□□ -0.81
XRN1-208ENST00000470537 PLXNA3P51805 1871 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 SMCO2A6NFE2 343 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 DDX39AO00148 427 aaKnown RBP9.98□□□□□ -0.81
XRN1-208ENST00000470537 CCNE2O96020 404 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 ASGR2P07307 311 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 SDHBP21912 280 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 CHMLP26374 656 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 GMPRP36959 345 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 METAP2P50579 478 aaKnown RBP eCLIP9.98□□□□□ -0.81
XRN1-208ENST00000470537 ANTXR2P58335 489 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 RNASELQ05823 741 aaKnown RBP9.98□□□□□ -0.81
XRN1-208ENST00000470537 PUM1Q14671 1186 aaKnown RBP eCLIP9.98□□□□□ -0.81
XRN1-208ENST00000470537 TTC22Q5TAA0 569 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 GLB1LQ6UWU2 654 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 DGLUCYQ7Z3D6 616 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 GPR149Q86SP6 731 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 CCDC60Q8IWA6 550 aaPredicted RBP9.98□□□□□ -0.81
XRN1-208ENST00000470537 CMTR1Q8N1G2 835 aaKnown RBP9.98□□□□□ -0.81
XRN1-208ENST00000470537 CCDC12Q8WUD4 166 aaPredicted RBP9.98□□□□□ -0.81
XRN1-208ENST00000470537 TRAIPQ9BWF2 469 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 GCOM2Q9BZD3 368 aaPredicted RBP9.98□□□□□ -0.81
XRN1-208ENST00000470537 KANSL3Q9P2N6 904 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 DUSP12Q9UNI6 340 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 EVPLQ92817 2033 aa9.98□□□□□ -0.81
XRN1-208ENST00000470537 DCHS1Q96JQ0 3298 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 hCG_1642624A0A1W2PR95 340 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 ZBTB42B2RXF5 422 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 SH2B2O14492 632 aaPredicted RBP9.97□□□□□ -0.81
XRN1-208ENST00000470537 SGSM2O43147 1006 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 ZC3H11AO75152 810 aaKnown RBP eCLIP9.97□□□□□ -0.81
XRN1-208ENST00000470537 IGHDP01880 384 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 ALDH2P05091 517 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 CYP3A4P08684 503 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 DARSP14868 501 aaKnown RBP9.97□□□□□ -0.81
XRN1-208ENST00000470537 SFPQP23246 707 aaKnown RBP eCLIP9.97□□□□□ -0.81
XRN1-208ENST00000470537 KLRC2P26717 231 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 PBX3P40426 434 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 TBC1D8BQ0IIM8 1120 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 LETM2Q2VYF4 491 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 RNF20Q5VTR2 975 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 TMC5Q6UXY8 1006 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 TRMT1LQ7Z2T5 733 aaKnown RBP9.97□□□□□ -0.81
XRN1-208ENST00000470537 SGMS1Q86VZ5 419 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 NPAS3Q8IXF0 933 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 SIX5Q8N196 739 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 HELQQ8TDG4 1101 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 PGBD4Q96DM1 585 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 IGSF21Q96ID5 467 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 PPP1R16BQ96T49 567 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 HINFPQ9BQA5 517 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 ZBP1Q9H171 429 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 KCNK12Q9HB15 430 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 EVA1BQ9NVM1 165 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 BARHL2Q9NY43 387 aa9.97□□□□□ -0.81
XRN1-208ENST00000470537 RBM8AQ9Y5S9 174 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms