RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 MUSKO15146 869 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 PRAMEF4O60810 478 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 CDK11BP21127 795 aaKnown RBP5.4□□□□□ -1.54
BRCA2-202ENST00000470094 ACO1P21399 889 aaKnown RBP5.4□□□□□ -1.54
BRCA2-202ENST00000470094 NPEPPSP55786 919 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 MRPS9P82933 396 aaKnown RBP5.4□□□□□ -1.54
BRCA2-202ENST00000470094 CDK17Q00537 523 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 AMPD3Q01432 767 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 MEF2AQ02078 507 aaPredicted RBP5.4□□□□□ -1.54
BRCA2-202ENST00000470094 PRKD1Q15139 912 aaPredicted RBP5.4□□□□□ -1.54
BRCA2-202ENST00000470094 FAM111BQ6SJ93 734 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 PALM2Q8IXS6 379 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 CNTD1Q8N815 330 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 AUTS2Q8WXX7 1259 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 ARL8AQ96BM9 186 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 BORCS6Q96GS4 357 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 ORAI2Q96SN7 254 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 MPHOSPH9Q99550 1183 aa5.4□□□□□ -1.54
BRCA2-202ENST00000470094 ANKRD62A6NC57 917 aa5.39□□□□□ -1.55
BRCA2-202ENST00000470094 K7ESF4 209 aa5.39□□□□□ -1.55
BRCA2-202ENST00000470094 LTA4HP09960 611 aaKnown RBP5.39□□□□□ -1.55
BRCA2-202ENST00000470094 CDKN1CP49918 316 aaPredicted RBP5.39□□□□□ -1.55
BRCA2-202ENST00000470094 ERVK-21P61565 698 aa5.39□□□□□ -1.55
BRCA2-202ENST00000470094 SGMS1Q86VZ5 419 aa5.39□□□□□ -1.55
BRCA2-202ENST00000470094 AMOTL1Q8IY63 956 aa5.39□□□□□ -1.55
BRCA2-202ENST00000470094 FAM177A1Q8N128 213 aaPredicted RBP5.39□□□□□ -1.55
BRCA2-202ENST00000470094 EDAQ92838 391 aa5.39□□□□□ -1.55
BRCA2-202ENST00000470094 MENTQ9BUN1 341 aa5.39□□□□□ -1.55
BRCA2-202ENST00000470094 CCM2LQ9NUG4 571 aaPredicted RBP5.39□□□□□ -1.55
BRCA2-202ENST00000470094 DNAJC28Q9NX36 388 aa5.39□□□□□ -1.55
BRCA2-202ENST00000470094 TSC22D4Q9Y3Q8 395 aa5.39□□□□□ -1.55
BRCA2-202ENST00000470094 CAPN14A8MX76 684 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 GPR3P46089 330 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 GUCY2FP51841 1108 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 WNT3AP56704 352 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 SRSF2Q01130 221 aaKnown RBP5.38□□□□□ -1.55
BRCA2-202ENST00000470094 DUSP2Q05923 314 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 KLF1Q13351 362 aaPredicted RBP5.38□□□□□ -1.55
BRCA2-202ENST00000470094 R3HDM1Q15032 1099 aaKnown RBP5.38□□□□□ -1.55
BRCA2-202ENST00000470094 UBE3CQ15386 1083 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 MUM1Q2TAK8 710 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 TOR2AQ5JU69 321 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 ANKRD35Q8N283 1001 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 ZNF808Q8N4W9 903 aaPredicted RBP5.38□□□□□ -1.55
BRCA2-202ENST00000470094 MSL3Q8N5Y2 521 aaKnown RBP5.38□□□□□ -1.55
BRCA2-202ENST00000470094 PRPF38AQ8NAV1 312 aaKnown RBP5.38□□□□□ -1.55
BRCA2-202ENST00000470094 OR5M3Q8NGP4 307 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 IFT122Q9HBG6 1241 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 PCDH12Q9NPG4 1184 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 TLR9Q9NR96 1032 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 ZBTB21Q9ULJ3 1066 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 SH3BP1Q9Y3L3 701 aa5.38□□□□□ -1.55
BRCA2-202ENST00000470094 ALG1L2C9J202 215 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 CYP27B1O15528 508 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 TMEM127O75204 238 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 IBSPP21815 317 aaPredicted RBP5.37□□□□□ -1.55
BRCA2-202ENST00000470094 CCT2P78371 535 aaKnown RBP5.37□□□□□ -1.55
BRCA2-202ENST00000470094 FAM50AQ14320 339 aaKnown RBP5.37□□□□□ -1.55
BRCA2-202ENST00000470094 CDSNQ15517 529 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 PTPROQ16827 1216 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 FKBP15Q5T1M5 1219 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 MFSD5Q6N075 450 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 MAMDC4Q6UXC1 1216 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 Q6ZSN1 163 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 KCNK18Q7Z418 384 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 TSPEARQ8WU66 669 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 ACE2Q9BYF1 805 aaPredicted RBP5.37□□□□□ -1.55
BRCA2-202ENST00000470094 EPC1Q9H2F5 836 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 TESMINQ9Y4I5 508 aa5.37□□□□□ -1.55
BRCA2-202ENST00000470094 C1QTNF3-AMACRE9PGA6 284 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 GYPEP15421 78 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 CTSSP25774 331 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 HIBADHP31937 336 aaKnown RBP5.36□□□□□ -1.55
BRCA2-202ENST00000470094 CASRP41180 1078 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 SLC5A3P53794 718 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 ITKQ08881 620 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 ELAVL1Q15717 326 aaKnown RBP5.36□□□□□ -1.55
BRCA2-202ENST00000470094 ADRM1Q16186 407 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 ANO4Q32M45 955 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 C19orf54Q5BKX5 351 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 SPDYAQ5MJ70 313 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 BTNL9Q6UXG8 535 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 ABHD15Q6UXT9 468 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 GLB1L3Q8NCI6 653 aaPredicted RBP5.36□□□□□ -1.55
BRCA2-202ENST00000470094 SNX33Q8WV41 574 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 FATE1Q969F0 183 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 MIEF2Q96C03 454 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 MTMR8Q96EF0 704 aa5.36□□□□□ -1.55
BRCA2-202ENST00000470094 ZNF512Q96ME7 567 aaPredicted RBP5.36□□□□□ -1.55
BRCA2-202ENST00000470094 RPTORQ8N122 1335 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 PHF2O75151 1096 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 IPO13O94829 963 aaKnown RBP5.35□□□□□ -1.55
BRCA2-202ENST00000470094 OSMP13725 252 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 GNAT2P19087 354 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 MTNR1BP49286 362 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 KRTAP10-2P60368 255 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 MTMR1Q13613 665 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 CLUL1Q15846 466 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 MUM1L1Q5H9M0 696 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms