RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 TSSK4Q6SA08 328 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 PARM1Q6UWI2 310 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 HEATR3Q7Z4Q2 680 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 SMAP1Q8IYB5 467 aaPredicted RBP13.57□□□□□ -0.24
LSM2-209ENST00000470083 NCOA7Q8NI08 942 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 URGCPQ8TCY9 931 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 DDX1Q92499 740 aaKnown RBP13.57□□□□□ -0.24
LSM2-209ENST00000470083 PGBD1Q96JS3 809 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 ANO3Q9BYT9 981 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 PRKD2Q9BZL6 878 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 LNPKQ9C0E8 428 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 IL25Q9H293 177 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 RXFP1Q9HBX9 757 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 FAM105AQ9NUU6 356 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 RAB23Q9ULC3 237 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 FAN1Q9Y2M0 1017 aa13.57□□□□□ -0.24
LSM2-209ENST00000470083 EVPLQ92817 2033 aa13.56□□□□□ -0.24
LSM2-209ENST00000470083 hCG_1642624A0A1W2PR95 340 aa13.56□□□□□ -0.24
LSM2-209ENST00000470083 IPO5O00410 1097 aaKnown RBP13.56□□□□□ -0.24
LSM2-209ENST00000470083 DDHD2O94830 711 aa13.56□□□□□ -0.24
LSM2-209ENST00000470083 ALDH2P05091 517 aa13.56□□□□□ -0.24
LSM2-209ENST00000470083 RETP07949 1114 aa13.56□□□□□ -0.24
LSM2-209ENST00000470083 SFPQP23246 707 aaKnown RBP eCLIP13.56□□□□□ -0.24
LSM2-209ENST00000470083 SREBF1P36956 1147 aa13.56□□□□□ -0.24
LSM2-209ENST00000470083 PFKPQ01813 784 aa13.56□□□□□ -0.24
LSM2-209ENST00000470083 CMTR1Q8N1G2 835 aaKnown RBP13.56□□□□□ -0.24
LSM2-209ENST00000470083 NELL2Q99435 816 aa13.56□□□□□ -0.24
LSM2-209ENST00000470083 GCOM2Q9BZD3 368 aaPredicted RBP13.56□□□□□ -0.24
LSM2-209ENST00000470083 CDH7Q9ULB5 785 aa13.56□□□□□ -0.24
LSM2-209ENST00000470083 PIN4Q9Y237 131 aaKnown RBP13.56□□□□□ -0.24
LSM2-209ENST00000470083 E7EWF7 191 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 FAM86B1E9PN63 330 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 NRP1O14786 923 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 NCAM2O15394 837 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 PSAPP07602 524 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 FAM86B2P0C5J1 330 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 SPATA31D3P0C874 917 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
LSM2-209ENST00000470083 CD72P21854 359 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 FSHRP23945 695 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 TARSP26639 723 aaKnown RBP13.55□□□□□ -0.24
LSM2-209ENST00000470083 ZNF76P36508 570 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 GLUD2P49448 558 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 CDC42EP1Q00587 391 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 HDAC1Q13547 482 aaPredicted RBP13.55□□□□□ -0.24
LSM2-209ENST00000470083 SPATA31D4Q6ZUB0 917 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 MTSS1LQ765P7 747 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 PLA2G4DQ86XP0 818 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 RNF168Q8IYW5 571 aaPredicted RBP13.55□□□□□ -0.24
LSM2-209ENST00000470083 CELF5Q8N6W0 485 aaKnown RBP13.55□□□□□ -0.24
LSM2-209ENST00000470083 PGBD4Q96DM1 585 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 FAM193BQ96PV7 902 aaPredicted RBP13.55□□□□□ -0.24
LSM2-209ENST00000470083 OSBPL3Q9H4L5 887 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 RIC8AQ9NPQ8 531 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 SEMA4GQ9NTN9 838 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 TBC1D22BQ9NU19 505 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 MARCH5Q9NX47 278 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 KANSL3Q9P2N6 904 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 GABBR1Q9UBS5 961 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 PCDHA10Q9Y5I2 948 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 TAF6LQ9Y6J9 622 aa13.55□□□□□ -0.24
LSM2-209ENST00000470083 IGLV3-22A0A075B6J6 115 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 TGM5O43548 720 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 GAS2O43903 313 aaKnown RBP13.54□□□□□ -0.24
LSM2-209ENST00000470083 EFEMP2O95967 443 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 OATP04181 439 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 TDGF1P13385 188 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 AFF1P51825 1210 aaKnown RBP13.54□□□□□ -0.24
LSM2-209ENST00000470083 NRLP54845 237 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 DSG1Q02413 1049 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 AP3B2Q13367 1082 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 LPAL2Q16609 132 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 AGMOQ6ZNB7 445 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 PRR23CQ6ZRP0 262 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 TAS1R1Q7RTX1 841 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 MB21D2Q8IYB1 491 aaPredicted RBP13.54□□□□□ -0.24
LSM2-209ENST00000470083 FAM217BQ9NTX9 383 aaPredicted RBP13.54□□□□□ -0.24
LSM2-209ENST00000470083 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
LSM2-209ENST00000470083 COL4A3Q01955 1670 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 ZNF862O60290 1169 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 FOXD2O60548 495 aaPredicted RBP13.53□□□□□ -0.24
LSM2-209ENST00000470083 PROS1P07225 676 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 MTAPQ13126 283 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 DRP2Q13474 957 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 CSRP2Q16527 193 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 WWC2Q6AWC2 1192 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 TPRG1Q6ZUI0 275 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 PALB2Q86YC2 1186 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 PLEKHM2Q8IWE5 1019 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 ZNF577Q9BSK1 485 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 MTA3Q9BTC8 594 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 INO80BQ9C086 356 aaPredicted RBP13.53□□□□□ -0.24
LSM2-209ENST00000470083 RSAD1Q9HA92 442 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 NRBP2Q9NSY0 501 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 PRG3Q9Y2Y8 225 aaPredicted RBP13.53□□□□□ -0.24
LSM2-209ENST00000470083 PCDHB2Q9Y5E7 798 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 CNTNAP2Q9UHC6 1331 aa13.53□□□□□ -0.24
LSM2-209ENST00000470083 PATJQ8NI35 1801 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms