RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 BCL7CQ8WUZ0 217 aaPredicted RBP18.15■□□□□ 0.5
COL9A3-208ENST00000469802 PGBD4Q96DM1 585 aa18.15■□□□□ 0.5
COL9A3-208ENST00000469802 TMEM169Q96HH4 297 aa18.15■□□□□ 0.5
COL9A3-208ENST00000469802 NFKBIZQ9BYH8 718 aa18.15■□□□□ 0.5
COL9A3-208ENST00000469802 NRDE2Q9H7Z3 1164 aa18.15■□□□□ 0.5
COL9A3-208ENST00000469802 TUFT1Q9NNX1 390 aa18.15■□□□□ 0.5
COL9A3-208ENST00000469802 NT5C1B-RDH14C9J2C7 533 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 INPPL1O15357 1258 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 AXLP30530 894 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 RBM25P49756 843 aaKnown RBP18.14■□□□□ 0.49
COL9A3-208ENST00000469802 MBTD1Q05BQ5 628 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 AMHR2Q16671 573 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 ANKRD54Q6NXT1 300 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 TMC7Q7Z402 723 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 MRPL43Q8N983 215 aaKnown RBP18.14■□□□□ 0.49
COL9A3-208ENST00000469802 SMG8Q8ND04 991 aaKnown RBP18.14■□□□□ 0.49
COL9A3-208ENST00000469802 PIGOQ8TEQ8 1089 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 CCDC51Q96ER9 411 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 IGSF21Q96ID5 467 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 ZBP1Q9H171 429 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 S1PR5Q9H228 398 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 RSAD1Q9HA92 442 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 DNAJB4Q9UDY4 337 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 INPP5FQ9Y2H2 1132 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 TECTAO75443 2155 aa18.14■□□□□ 0.49
COL9A3-208ENST00000469802 ZNF318Q5VUA4 2279 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 PRR33A8MZF0 331 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 LOC730098B7Z3J9 87 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 MED24O75448 989 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 ERLIN2O94905 339 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 GALTP07902 379 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 OR52Z1P0C646 297 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 SRGAP2BP0DMP2 458 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 NCLP19338 710 aaKnown RBP18.13■□□□□ 0.49
COL9A3-208ENST00000469802 ATP2B1P20020 1258 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 GLRA2P23416 452 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 AFF1P51825 1210 aaKnown RBP18.13■□□□□ 0.49
COL9A3-208ENST00000469802 TFDP1Q14186 410 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 CBX2Q14781 532 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-208ENST00000469802 SYCE2Q6PIF2 218 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 DDX53Q86TM3 631 aaKnown RBP18.13■□□□□ 0.49
COL9A3-208ENST00000469802 CATSPER3Q86XQ3 398 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 ZNF280BQ86YH2 543 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 POLR3CQ9BUI4 534 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-208ENST00000469802 VN1R3Q9BXE9 311 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 IRAK3Q9Y616 596 aa18.13■□□□□ 0.49
COL9A3-208ENST00000469802 PLXNA3P51805 1871 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 C2orf16Q68DN1 1984 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 TRAPPC10P48553 1259 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 SLC11A1P49279 550 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 HERC4Q5GLZ8 1057 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-208ENST00000469802 NOTUMQ6P988 496 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 RNF135Q8IUD6 432 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 NOSTRINQ8IVI9 506 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 CNNM3Q8NE01 707 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 URGCPQ8TCY9 931 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 CCDC43Q96MW1 224 aaKnown RBP18.12■□□□□ 0.49
COL9A3-208ENST00000469802 PHF7Q9BWX1 381 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-208ENST00000469802 EIF2AQ9BY44 585 aaKnown RBP18.12■□□□□ 0.49
COL9A3-208ENST00000469802 POLR3FQ9H1D9 316 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-208ENST00000469802 DBR1Q9UK59 544 aaKnown RBP18.12■□□□□ 0.49
COL9A3-208ENST00000469802 ARIH1Q9Y4X5 557 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-208ENST00000469802 IPPQ9Y573 584 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 HCFC2Q9Y5Z7 792 aa18.12■□□□□ 0.49
COL9A3-208ENST00000469802 A0A087WWV3 80 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 INO80B-WBP1J3KQ70 363 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 USO1O60763 962 aaKnown RBP18.11■□□□□ 0.49
COL9A3-208ENST00000469802 CLASP2O75122 1294 aaKnown RBP18.11■□□□□ 0.49
COL9A3-208ENST00000469802 DDHD2O94830 711 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 CTSAP10619 480 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 HOXB8P17481 243 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-208ENST00000469802 ARF4P18085 180 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-208ENST00000469802 RPA1P27694 616 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 TECP42680 631 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 RNASELQ05823 741 aaKnown RBP18.11■□□□□ 0.49
COL9A3-208ENST00000469802 ZNF174Q15697 407 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 TTC38Q5R3I4 469 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 VPS52Q8N1B4 723 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 TMEM175Q9BSA9 504 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 CSRNP2Q9H175 543 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 MUTYHQ9UIF7 546 aa18.11■□□□□ 0.49
COL9A3-208ENST00000469802 ZMYM2Q9UBW7 1377 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 U2AF2P26368 475 aaKnown RBP eCLIP18.1■□□□□ 0.494e-7■■■□□ 15.2
COL9A3-208ENST00000469802 CDCA2Q69YH5 1023 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-208ENST00000469802 LLGL2Q6P1M3 1020 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 POTEGQ6S5H5 508 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 C4orf32Q8N8J7 132 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 MCPH1Q8NEM0 835 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 CASP10Q92851 521 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 CPB2Q96IY4 423 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 GBP3Q9H0R5 595 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 UBN1Q9NPG3 1134 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 GPRC5CQ9NQ84 441 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 KANSL3Q9P2N6 904 aa18.1■□□□□ 0.49
COL9A3-208ENST00000469802 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-208ENST00000469802 B4GALT5O43286 388 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 ITGA4P13612 1032 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 MUTP22033 750 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 FXR2P51116 673 aaKnown RBP eCLIP18.09■□□□□ 0.49
COL9A3-208ENST00000469802 DSC1Q08554 894 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms