RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 RABGGTAQ92696 567 aa4.38□□□□□ -1.71
TPR-204ENST00000469463 CLIP3Q96DZ5 547 aa4.38□□□□□ -1.71
TPR-204ENST00000469463 WDR92Q96MX6 357 aa4.38□□□□□ -1.71
TPR-204ENST00000469463 PCDHB6Q9Y5E3 794 aa4.38□□□□□ -1.71
TPR-204ENST00000469463 PPP2R3BQ9Y5P8 575 aa4.38□□□□□ -1.71
TPR-204ENST00000469463 DMRT1Q9Y5R6 373 aa4.38□□□□□ -1.71
TPR-204ENST00000469463 ELL2O00472 640 aaPredicted RBP4.37□□□□□ -1.71
TPR-204ENST00000469463 DAPK3O43293 454 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 OPHN1O60890 802 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 LPLP06858 475 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 TGM1P22735 817 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 SCAND1P57086 179 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 RIN1Q13671 783 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 FAM50AQ14320 339 aaKnown RBP4.37□□□□□ -1.71
TPR-204ENST00000469463 CT83Q5H943 113 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 GPR158Q5T848 1215 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 LMBR1LQ6UX01 489 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 LHFPL2Q6ZUX7 228 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 BMP8AQ7Z5Y6 402 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 CDYL2Q8N8U2 506 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 TGFBRAP1Q8WUH2 860 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 ZNF496Q96IT1 587 aaPredicted RBP4.37□□□□□ -1.71
TPR-204ENST00000469463 UIMC1Q96RL1 719 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 QRSL1Q9H0R6 528 aaKnown RBP4.37□□□□□ -1.71
TPR-204ENST00000469463 TMX1Q9H3N1 280 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 TOPORSQ9NS56 1045 aaPredicted RBP4.37□□□□□ -1.71
TPR-204ENST00000469463 EDARQ9UNE0 448 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 MYPNQ86TC9 1320 aa4.37□□□□□ -1.71
TPR-204ENST00000469463 GOLGA8AA7E2F4 631 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 VIL1P09327 827 aaKnown RBP4.36□□□□□ -1.71
TPR-204ENST00000469463 HNRNPLP14866 589 aaKnown RBP eCLIP4.36□□□□□ -1.71
TPR-204ENST00000469463 PTGS2P35354 604 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 MANFP55145 182 aaKnown RBP4.36□□□□□ -1.71
TPR-204ENST00000469463 ANTXR2P58335 489 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 BPIFB4P59827 614 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 CCT2P78371 535 aaKnown RBP4.36□□□□□ -1.71
TPR-204ENST00000469463 TCIRG1Q13488 830 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 RRP1BQ14684 758 aaKnown RBP4.36□□□□□ -1.71
TPR-204ENST00000469463 PCSK4Q6UW60 755 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 RASSF3Q86WH2 238 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 FAM177A1Q8N128 213 aaPredicted RBP4.36□□□□□ -1.71
TPR-204ENST00000469463 GFM2Q969S9 779 aaKnown RBP4.36□□□□□ -1.71
TPR-204ENST00000469463 MIEF2Q96C03 454 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 MTMR8Q96EF0 704 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 AHCYL2Q96HN2 611 aaKnown RBP4.36□□□□□ -1.71
TPR-204ENST00000469463 TMEM176AQ96HP8 235 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 RPL10LQ96L21 214 aaKnown RBP4.36□□□□□ -1.71
TPR-204ENST00000469463 AGAP2Q99490 1192 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 RCAN3Q9UKA8 241 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 WASHC2AQ641Q2 1341 aa4.36□□□□□ -1.71
TPR-204ENST00000469463 A0A1W2PRX2 142 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 PRSS38A1L453 326 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 GPR39O43194 453 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 NRP2O60462 931 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 PRAMEF4O60810 478 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 IBSPP21815 317 aaPredicted RBP4.35□□□□□ -1.71
TPR-204ENST00000469463 NRG3P56975 720 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 ATP2C1P98194 919 aaPredicted RBP4.35□□□□□ -1.71
TPR-204ENST00000469463 MGAT5Q09328 741 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 CNGB1Q14028 1251 aaPredicted RBP4.35□□□□□ -1.71
TPR-204ENST00000469463 ACAP1Q15027 740 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 CLUL1Q15846 466 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 UGT8Q16880 541 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.35□□□□□ -1.71
TPR-204ENST00000469463 RNF219Q5W0B1 726 aaPredicted RBP4.35□□□□□ -1.71
TPR-204ENST00000469463 SPTY2D1Q68D10 685 aaPredicted RBP4.35□□□□□ -1.71
TPR-204ENST00000469463 ZNF627Q7L945 461 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 DDX42Q86XP3 938 aaKnown RBP eCLIP4.35□□□□□ -1.71
TPR-204ENST00000469463 ANKRD53Q8N9V6 530 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 GAB3Q8WWW8 586 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 SLC7A6OSQ96CW6 309 aaPredicted RBP4.35□□□□□ -1.71
TPR-204ENST00000469463 SMAD5Q99717 465 aaKnown RBP4.35□□□□□ -1.71
TPR-204ENST00000469463 EPC1Q9H2F5 836 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 KCTD10Q9H3F6 313 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 C14orf119Q9NWQ9 140 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 ATP8A1Q9Y2Q0 1164 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 CTDP1Q9Y5B0 961 aaPredicted RBP4.35□□□□□ -1.71
TPR-204ENST00000469463 COL4A3BPQ9Y5P4 624 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 CADPSQ9ULU8 1353 aa4.35□□□□□ -1.71
TPR-204ENST00000469463 FOXN1O15353 648 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 PRKD3O94806 890 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 FSBPO95073 299 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 MAN2A2P49641 1150 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 LGALS4P56470 323 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 CDK17Q00537 523 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 SPIDRQ14159 915 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 DPY19L2P1Q6NXN4 242 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 KANSL1Q7Z3B3 1105 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 GLB1L2Q8IW92 636 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 CMIPQ8IY22 773 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 AMOTL1Q8IY63 956 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 BCL6BQ8N143 479 aaPredicted RBP4.34□□□□□ -1.71
TPR-204ENST00000469463 OR14C36Q8NHC7 312 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 ZCRB1Q8TBF4 217 aaKnown RBP4.34□□□□□ -1.71
TPR-204ENST00000469463 ARL8AQ96BM9 186 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 EAF2Q96CJ1 260 aaPredicted RBP4.34□□□□□ -1.71
TPR-204ENST00000469463 ACAP3Q96P50 834 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 PITHD1Q9GZP4 211 aaPredicted RBP4.34□□□□□ -1.71
TPR-204ENST00000469463 SLC6A15Q9H2J7 730 aa4.34□□□□□ -1.71
TPR-204ENST00000469463 C14orf93Q9H972 538 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms