RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
COL27A1-203ENST00000468565 UBE2HP62256 183 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 CAPSQ13938 189 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 CLLU1OSQ5K130 101 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 SPOUT1Q5T280 376 aaKnown RBP16.04■□□□□ 0.16
COL27A1-203ENST00000468565 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
COL27A1-203ENST00000468565 ALG13Q9NP73 1137 aaKnown RBP16.04■□□□□ 0.16
COL27A1-203ENST00000468565 XIRP2A4UGR9 3374 aa16.03■□□□□ 0.16
COL27A1-203ENST00000468565 MYH11P35749 1972 aa16.03■□□□□ 0.16
COL27A1-203ENST00000468565 GADD45BO75293 160 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-203ENST00000468565 GLRA2P23416 452 aa16.03■□□□□ 0.16
COL27A1-203ENST00000468565 ATP2C1P98194 919 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-203ENST00000468565 UBE3AQ05086 875 aa16.03■□□□□ 0.16
COL27A1-203ENST00000468565 DTHD1Q6ZMT9 781 aa16.03■□□□□ 0.16
COL27A1-203ENST00000468565 COLGALT1Q8NBJ5 622 aa16.03■□□□□ 0.16
COL27A1-203ENST00000468565 RNF169Q8NCN4 708 aa16.03■□□□□ 0.16
COL27A1-203ENST00000468565 SPPL3Q8TCT6 385 aa16.03■□□□□ 0.16
COL27A1-203ENST00000468565 PPP1R9BQ96SB3 815 aa16.03■□□□□ 0.16
COL27A1-203ENST00000468565 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
COL27A1-203ENST00000468565 POLR3FQ9H1D9 316 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-203ENST00000468565 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.02■□□□□ 0.16
COL27A1-203ENST00000468565 ARHGEF35A5YM69 484 aa16.02■□□□□ 0.16
COL27A1-203ENST00000468565 AXLP30530 894 aa16.02■□□□□ 0.16
COL27A1-203ENST00000468565 TFF2Q03403 129 aa16.02■□□□□ 0.16
COL27A1-203ENST00000468565 CAMK1Q14012 370 aa16.02■□□□□ 0.16
COL27A1-203ENST00000468565 TCEAL5Q5H9L2 206 aa16.02■□□□□ 0.16
COL27A1-203ENST00000468565 PADI6Q6TGC4 694 aa16.02■□□□□ 0.16
COL27A1-203ENST00000468565 LRRC55Q6ZSA7 311 aa16.02■□□□□ 0.16
COL27A1-203ENST00000468565 SNX29Q8TEQ0 813 aa16.02■□□□□ 0.16
COL27A1-203ENST00000468565 RBSNQ9H1K0 784 aa16.02■□□□□ 0.16
COL27A1-203ENST00000468565 UBE2ZQ9H832 354 aaPredicted RBP16.02■□□□□ 0.16
COL27A1-203ENST00000468565 TDRD15B5MCY1 1934 aaKnown RBP16.02■□□□□ 0.16
COL27A1-203ENST00000468565 ERLIN2O94905 339 aa16.02■□□□□ 0.15
COL27A1-203ENST00000468565 HOXA11P31270 313 aaPredicted RBP16.02■□□□□ 0.15
COL27A1-203ENST00000468565 COL19A1Q14993 1142 aa16.02■□□□□ 0.15
COL27A1-203ENST00000468565 IL17AQ16552 155 aa16.02■□□□□ 0.15
COL27A1-203ENST00000468565 ECM1Q16610 540 aa16.02■□□□□ 0.15
COL27A1-203ENST00000468565 HELQQ8TDG4 1101 aa16.02■□□□□ 0.15
COL27A1-203ENST00000468565 POF1BQ8WVV4 589 aa16.02■□□□□ 0.15
COL27A1-203ENST00000468565 PGBD4Q96DM1 585 aa16.02■□□□□ 0.15
COL27A1-203ENST00000468565 CCDC51Q96ER9 411 aa16.02■□□□□ 0.15
COL27A1-203ENST00000468565 HCSTQ9UBK5 93 aa16.02■□□□□ 0.15
COL27A1-203ENST00000468565 NCOR1O75376 2440 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 NCK2O43639 380 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 TSPAN1O60635 241 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
COL27A1-203ENST00000468565 CYP11B2P19099 503 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 DNAJB1P25685 340 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 MBTD1Q05BQ5 628 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 KRT79Q5XKE5 535 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
COL27A1-203ENST00000468565 BRAPQ7Z569 592 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 TSPY26PQ9H489 355 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 GPRC5CQ9NQ84 441 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 KIAA1024Q9UPX6 916 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 PCDHB2Q9Y5E7 798 aa16.01■□□□□ 0.15
COL27A1-203ENST00000468565 INO80B-WBP1J3KQ70 363 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 FGF18O76093 207 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 BMP1P13497 986 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
COL27A1-203ENST00000468565 UBXN11Q5T124 520 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 CCDC183Q5T5S1 534 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 MRPL10Q7Z7H8 261 aaKnown RBP16■□□□□ 0.15
COL27A1-203ENST00000468565 THNSL1Q8IYQ7 743 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 PABPC5Q96DU9 382 aaKnown RBP16■□□□□ 0.15
COL27A1-203ENST00000468565 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
COL27A1-203ENST00000468565 TTC28Q96AY4 2481 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 CNTNAP2Q9UHC6 1331 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 CARNS1A5YM72 827 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 PPM1AP35813 382 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 KCNQ1P51787 676 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 PLCB3Q01970 1234 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 DNM1Q05193 864 aaKnown RBP16■□□□□ 0.15
COL27A1-203ENST00000468565 AMHR2Q16671 573 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 NOTUMQ6P988 496 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 KCNT2Q6UVM3 1135 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 GLB1LQ6UWU2 654 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 MAEAQ7L5Y9 396 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 CNNM3Q8NE01 707 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 LPPQ93052 612 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 ZNF558Q96NG5 402 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 LZTS1Q9Y250 596 aa16■□□□□ 0.15
COL27A1-203ENST00000468565 MYH15Q9Y2K3 1946 aa15.99■□□□□ 0.15
COL27A1-203ENST00000468565 KRT85P78386 507 aa15.99■□□□□ 0.15
COL27A1-203ENST00000468565 CDCA2Q69YH5 1023 aaPredicted RBP15.99■□□□□ 0.15
COL27A1-203ENST00000468565 KCTD17Q8N5Z5 321 aa15.99■□□□□ 0.15
COL27A1-203ENST00000468565 ADAMTS19Q8TE59 1207 aa15.99■□□□□ 0.15
COL27A1-203ENST00000468565 PPP2R3CQ969Q6 453 aa15.99■□□□□ 0.15
COL27A1-203ENST00000468565 MMTAG2Q9BU76 263 aaKnown RBP15.99■□□□□ 0.15
COL27A1-203ENST00000468565 LRRIQ4A6NIV6 560 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 PP2D1A8MPX8 630 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 EYA4O95677 639 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 BMP15O95972 392 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 LEXMQ3ZCV2 418 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 HYIQ5T013 277 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 PDE12Q6L8Q7 609 aaKnown RBP15.98■□□□□ 0.15
COL27A1-203ENST00000468565 ZBTB8OSQ8IWT0 167 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 MRPS27Q92552 414 aaKnown RBP15.98■□□□□ 0.15
COL27A1-203ENST00000468565 PRIMPOLQ96LW4 560 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms