RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 RUSC1Q9BVN2 902 aa20.62■□□□□ 0.89
YBX1-204ENST00000467957 CCDC113Q9H0I3 377 aa20.62■□□□□ 0.89
YBX1-204ENST00000467957 C17orf75Q9HAS0 396 aa20.62■□□□□ 0.89
YBX1-204ENST00000467957 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
YBX1-204ENST00000467957 MYH15Q9Y2K3 1946 aa20.62■□□□□ 0.89
YBX1-204ENST00000467957 CNTNAP2Q9UHC6 1331 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 MEIS3P2A8K0S8 358 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 B4GALT5O43286 388 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 HIP1RO75146 1068 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 OFD1O75665 1012 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 ITGB1P05556 798 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 MARCKSP29966 332 aaPredicted RBP20.61■□□□□ 0.89
YBX1-204ENST00000467957 NASPP49321 788 aaPredicted RBP20.61■□□□□ 0.89
YBX1-204ENST00000467957 EFNA5P52803 228 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 MAPK7Q13164 816 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 MAPK6Q16659 721 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 AGMOQ6ZNB7 445 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 SMG8Q8ND04 991 aaKnown RBP20.61■□□□□ 0.89
YBX1-204ENST00000467957 SPPL3Q8TCT6 385 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 PLIN2Q99541 437 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 POLD4Q9HCU8 107 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 UBN1Q9NPG3 1134 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 HCSTQ9UBK5 93 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 PRUNE2Q8WUY3 3088 aa20.61■□□□□ 0.89
YBX1-204ENST00000467957 ZSCAN22P10073 491 aaPredicted RBP20.6■□□□□ 0.89
YBX1-204ENST00000467957 CEBPZQ03701 1054 aaKnown RBP20.6■□□□□ 0.89
YBX1-204ENST00000467957 UBE3AQ05086 875 aa20.6■□□□□ 0.89
YBX1-204ENST00000467957 NOMO2Q5JPE7 1267 aa20.6■□□□□ 0.89
YBX1-204ENST00000467957 SLC27A1Q6PCB7 646 aa20.6■□□□□ 0.89
YBX1-204ENST00000467957 EIF2AQ9BY44 585 aaKnown RBP20.6■□□□□ 0.89
YBX1-204ENST00000467957 ALG13Q9NP73 1137 aaKnown RBP20.6■□□□□ 0.89
YBX1-204ENST00000467957 PRDM6Q9NQX0 595 aa20.6■□□□□ 0.89
YBX1-204ENST00000467957 THEGQ9P2T0 379 aa20.6■□□□□ 0.89
YBX1-204ENST00000467957 REV3LO60673 3130 aa20.6■□□□□ 0.89
YBX1-204ENST00000467957 ACKR2O00590 384 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 SSBP05455 408 aaKnown RBP eCLIP20.59■□□□□ 0.89
YBX1-204ENST00000467957 PLCG1P19174 1290 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 NPTX2P47972 431 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 CAMK1Q14012 370 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 KARSQ15046 597 aaKnown RBP20.59■□□□□ 0.89
YBX1-204ENST00000467957 LONRF3Q496Y0 759 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 KCNT2Q6UVM3 1135 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 ZNF396Q96N95 335 aaPredicted RBP20.59■□□□□ 0.89
YBX1-204ENST00000467957 ZNF558Q96NG5 402 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 NSUN3Q9H649 340 aaKnown RBP20.59■□□□□ 0.89
YBX1-204ENST00000467957 RSAD1Q9HA92 442 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 BLOC1S4Q9NUP1 217 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 KCNG1Q9UIX4 513 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 IPPQ9Y573 584 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 ATG2AQ2TAZ0 1938 aa20.59■□□□□ 0.89
YBX1-204ENST00000467957 PLXNA4Q9HCM2 1894 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 PHLPP2Q6ZVD8 1323 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 CARNS1A5YM72 827 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 INPPL1O15357 1258 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 FGF18O76093 207 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 F13A1P00488 732 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 PRKCBP05771 671 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 ITGA4P13612 1032 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 DNAJB1P25685 340 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 PPM1AP35813 382 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 PEX3P56589 373 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 PLCB3Q01970 1234 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 DMP1Q13316 513 aaPredicted RBP20.58■□□□□ 0.89
YBX1-204ENST00000467957 PRPF4BQ13523 1007 aaKnown RBP20.58■□□□□ 0.89
YBX1-204ENST00000467957 SKIV2LQ15477 1246 aaKnown RBP20.58■□□□□ 0.89
YBX1-204ENST00000467957 ARSHQ5FYA8 562 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 USP49Q70CQ1 688 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 KRI1Q8N9T8 703 aaKnown RBP20.58■□□□□ 0.89
YBX1-204ENST00000467957 LINC00301Q8NCQ3 95 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 LRRC15Q8TF66 581 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 POF1BQ8WVV4 589 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 ATXN2LQ8WWM7 1075 aaKnown RBP20.58■□□□□ 0.89
YBX1-204ENST00000467957 EPSTI1Q96J88 318 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 NTPCRQ9BSD7 190 aaKnown RBP20.58■□□□□ 0.89
YBX1-204ENST00000467957 KIFC3Q9BVG8 833 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 TRIM6Q9C030 488 aaPredicted RBP20.58■□□□□ 0.89
YBX1-204ENST00000467957 TMEM134Q9H6X4 195 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 TBC1D13Q9NVG8 400 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 ARHGAP28Q9P2N2 729 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 COG5Q9UP83 839 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 LZTS1Q9Y250 596 aa20.58■□□□□ 0.89
YBX1-204ENST00000467957 RBM19Q9Y4C8 960 aaKnown RBP20.58■□□□□ 0.89
YBX1-204ENST00000467957 CCDC169A6NNP5 214 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 K7ERI5 159 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 N4BP3O15049 544 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 THNSL1Q8IYQ7 743 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 HACE1Q8IYU2 909 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 SPRYD3Q8NCJ5 442 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 RASSF8Q8NHQ8 419 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 URGCPQ8TCY9 931 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 SPIRE2Q8WWL2 714 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 RAD54LQ92698 747 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 SYMPKQ92797 1274 aaKnown RBP20.57■□□□□ 0.88
YBX1-204ENST00000467957 CLIC6Q96NY7 704 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 KANSL3Q9P2N6 904 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 CCDC39Q9UFE4 941 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 ZMYM2Q9UBW7 1377 aa20.57■□□□□ 0.88
YBX1-204ENST00000467957 TTLL13PA6NNM8 815 aa20.56■□□□□ 0.88
YBX1-204ENST00000467957 PPP6R2O75170 966 aa20.56■□□□□ 0.88
YBX1-204ENST00000467957 YEATS4O95619 227 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms