RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	ZBTB8OS	Q8IWT0	167 aa		13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435	REXO1L1P	Q8IX06	675 aa		13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435	ZSWIM2	Q8NEG5	633 aa		13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435	PRPF31	Q8WWY3	499 aa	Known RBP	13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435	CHP1	Q99653	195 aa		13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435	C16orf70	Q9BSU1	422 aa		13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435	RNPEP	Q9H4A4	650 aa		13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435	NLRC4	Q9NPP4	1024 aa		13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435	PLCB1	Q9NQ66	1216 aa		13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435	ADGRG1	Q9Y653	693 aa		13.41	□□□□□ -0.26
HDLBP-231	ENST00000467435		K7ERI5	159 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	KIF2A	O00139	706 aa	Predicted RBP	13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	N4BP1	O75113	896 aa	Known RBP	13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	PPFIA4	O75335	1185 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	ALDH1A1	P00352	501 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	ACTN1	P12814	892 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	INSRR	P14616	1297 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	PON1	P27169	355 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	CTGF	P29279	349 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	HNRNPH3	P31942	346 aa	Known RBP	13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	CYP2C19	P33261	490 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	CLCN3	P51790	818 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	IGBP1	P78318	339 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	CDK17	Q00537	523 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	APBA1	Q02410	837 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	LAMTOR4	Q0VGL1	99 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	NOG	Q13253	232 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	TFDP1	Q14186	410 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	DGKD	Q16760	1214 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	CBWD6	Q4V339	395 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	CBWD3	Q5JTY5	395 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	CBWD5	Q5RIA9	395 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	TLK2	Q86UE8	772 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	CBWD2	Q8IUF1	395 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	GPD1L	Q8N335	351 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	ACRBP	Q8NEB7	543 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	FBXL18	Q96ME1	805 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	NUCKS1	Q9H1E3	243 aa	Known RBP	13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	C2orf40	Q9H1Z8	148 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	GJD2	Q9UKL4	321 aa		13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435	GNE	Q9Y223	722 aa	Known RBP	13.4	□□□□□ -0.26
HDLBP-231	ENST00000467435		H3BRB1	525 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	KIAA0391	O15091	583 aa	Known RBP	13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	NDUFA10	O95299	355 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	EDN1	P05305	212 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	CYLC1	P35663	651 aa	Predicted RBP	13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	EFNA5	P52803	228 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	DLG4	P78352	724 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	RAPGEF1	Q13905	1077 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	KLHDC7A	Q5VTJ3	777 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	SFMBT2	Q5VUG0	894 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	DPY19L2P1	Q6NXN4	242 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	EFCAB12	Q6NXP0	572 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	TRIM65	Q6PJ69	517 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	RHPN2	Q8IUC4	686 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	METTL13	Q8N6R0	699 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	RNF149	Q8NC42	400 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	LENG1	Q96BZ8	264 aa	Predicted RBP	13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	ZBTB10	Q96DT7	871 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	INTS2	Q9H0H0	1204 aa	Known RBP	13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	CCDC113	Q9H0I3	377 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	TUT1	Q9H6E5	874 aa	Known RBP	13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	SIX2	Q9NPC8	291 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	PLAGL2	Q9UPG8	496 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	FHOD1	Q9Y613	1164 aa		13.39	□□□□□ -0.27
HDLBP-231	ENST00000467435	ANK1	P16157	1881 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	MAGEB2	O15479	319 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	DYNC1LI2	O43237	492 aa	Predicted RBP	13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	AOC2	O75106	756 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	SRGAP2C	P0DJJ0	459 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	UCHL3	P15374	230 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	MATR3	P43243	847 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	MXI1	P50539	228 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	CYP24A1	Q07973	514 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	PPFIA1	Q13136	1202 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	GRIK4	Q16099	956 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	ASIC2	Q16515	512 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	C1orf220	Q5T0J3	134 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	SLFN12L	Q6IEE8	588 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	USP37	Q86T82	979 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	CCDC170	Q8IYT3	715 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	PLEKHO2	Q8TD55	490 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	SYN2	Q92777	582 aa	Predicted RBP	13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	CAPNS2	Q96L46	248 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	NLRP4	Q96MN2	994 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	FAM213A	Q9BRX8	229 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	TARS2	Q9BW92	718 aa	Known RBP	13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	MRPL4	Q9BYD3	311 aa	Known RBP	13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	ARHGAP39	Q9C0H5	1083 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	ANKFY1	Q9P2R3	1169 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	FBXL5	Q9UKA1	691 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435	STYXL1	Q9Y6J8	313 aa		13.38	□□□□□ -0.27
HDLBP-231	ENST00000467435		A6NJR5	290 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	P4HA2	O15460	535 aa		13.37	□□□□□ -0.27
HDLBP-231	ENST00000467435	ASAP2	O43150	1006 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms