RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 KIAA1217Q5T5P2 1943 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 KIF4AO95239 1232 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 LMNB1P20700 586 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 ABCB4P21439 1286 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 SNRNP35Q16560 246 aaKnown RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 SLC39A4Q6P5W5 647 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 ABHD15Q6UXT9 468 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 PAXIP1Q6ZW49 1069 aaPredicted RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 MSL3Q8N5Y2 521 aaKnown RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 SLC20A1Q8WUM9 679 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 SELENOOQ9BVL4 669 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 OSGEPQ9NPF4 335 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 SEPT11Q9NVA2 429 aaKnown RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 SEPT9Q9UHD8 586 aaPredicted RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 SNCAIPQ9Y6H5 919 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 DOCK5Q9H7D0 1870 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 ANKRD65E5RJM6 399 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 EIF3JO75822 258 aaKnown RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 MXI1P50539 228 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 PRKCEQ02156 737 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 MAP2K1Q02750 393 aaPredicted RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 CETN1Q12798 172 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 KIF22Q14807 665 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 IFI16Q16666 785 aaKnown RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 C8orf74Q6P047 294 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 C10orf67Q8IYJ2 551 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 KIFAP3Q92845 792 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 NTPCRQ9BSD7 190 aaKnown RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 FEZ2Q9UHY8 353 aaPredicted RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 INTUQ9ULD6 942 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 PPP2R3BQ9Y5P8 575 aa12.39□□□□□ -0.43
HPS1-208ENST00000467246 POLR2AP24928 1970 aaKnown RBP12.39□□□□□ -0.43
HPS1-208ENST00000467246 NFASCO94856 1347 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 IGSF9BQ9UPX0 1349 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 MAPK13O15264 365 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 P4HA2O15460 535 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 DDNO94850 711 aaPredicted RBP12.38□□□□□ -0.43
HPS1-208ENST00000467246 TNFAIP3P21580 790 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 CYP2C19P33261 490 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 SNRPFP62306 86 aaKnown RBP12.38□□□□□ -0.43
HPS1-208ENST00000467246 GNPTABQ3T906 1256 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 SLC17A8Q8NDX2 589 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 SLC35G2Q8TBE7 412 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 TAF4BQ92750 862 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 PDLIM7Q9NR12 457 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 CYP26B1Q9NR63 512 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 STIM2Q9P246 746 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 EXOC7Q9UPT5 735 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 A0A0A6YYK5 440 aaPredicted RBP12.38□□□□□ -0.43
HPS1-208ENST00000467246 CCDC172P0C7W6 258 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 GPS2Q13227 327 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 SH3D19Q5HYK7 790 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 SLFN11Q7Z7L1 901 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 DAAM2Q86T65 1068 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 ANKRD35Q8N283 1001 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 PARD3BQ8TEW8 1205 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 AENQ8WTP8 325 aaKnown RBP12.38□□□□□ -0.43
HPS1-208ENST00000467246 SPIRE2Q8WWL2 714 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 SEMA4DQ92854 862 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 ELMO3Q96BJ8 720 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 CDHR1Q96JP9 859 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 TOPORSQ9NS56 1045 aaPredicted RBP12.38□□□□□ -0.43
HPS1-208ENST00000467246 HPCAL4Q9UM19 191 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 USP20Q9Y2K6 914 aa12.38□□□□□ -0.43
HPS1-208ENST00000467246 ZSCAN5CA6NGD5 496 aaPredicted RBP12.37□□□□□ -0.43
HPS1-208ENST00000467246 PHACTR2O75167 634 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 DGAT1O75907 488 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 GLI1P08151 1106 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 ZBTB48P10074 688 aaPredicted RBP12.37□□□□□ -0.43
HPS1-208ENST00000467246 RFX1P22670 979 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 USP8P40818 1118 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 MTERF2Q49AM1 385 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 PEX26Q7Z412 305 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 USP38Q8NB14 1042 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 ARHGEF26Q96DR7 871 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 KRT12Q99456 494 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 AGPAT1Q99943 283 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 THAP2Q9H0W7 228 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 ACP6Q9NPH0 428 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 CALCOCO1Q9P1Z2 691 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 BTBD7Q9P203 1132 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 ATP8B3O60423 1300 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
HPS1-208ENST00000467246 CEP104O60308 925 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 ATP4AP20648 1035 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 STXBP2Q15833 593 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 SEPT14Q6ZU15 432 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 TAS1R3Q7RTX0 852 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 POMGNT1Q8WZA1 660 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 FAM84AQ96KN4 292 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 VIPAS39Q9H9C1 493 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.37□□□□□ -0.43
HPS1-208ENST00000467246 VPS18Q9P253 973 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 STXBP5LQ9Y2K9 1186 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms