RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 ARID2Q68CP9 1835 aa7.99□□□□□ -1.13
SND1-205ENST00000467238 WDR87Q6ZQQ6 2873 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 SPTBN4Q9H254 2564 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 ZBTB42B2RXF5 422 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 BACH1O14867 736 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 EDIL3O43854 480 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 DGKIO75912 1065 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 REC8O95072 547 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 THBS1P07996 1170 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 IFNAR1P17181 557 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 ATP4AP20648 1035 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 KLRC1P26715 233 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 PSMA5P28066 241 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 CIITAP33076 1130 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 BMPR1AP36894 532 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 EVCP57679 992 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 RAB15P59190 212 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 PAK2Q13177 524 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 BTG3Q14201 252 aaPredicted RBP7.98□□□□□ -1.13
SND1-205ENST00000467238 TCEAL5Q5H9L2 206 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 ZNF484Q5JVG2 852 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 MCTP2Q6DN12 878 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 ZNF746Q6NUN9 644 aaPredicted RBP7.98□□□□□ -1.13
SND1-205ENST00000467238 MIS18BP1Q6P0N0 1132 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 NPAS4Q8IUM7 802 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 NME8Q8N427 588 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 NEK9Q8TD19 979 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 RASGRP4Q8TDF6 673 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 LENG9Q96B70 501 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 PABPC5Q96DU9 382 aaKnown RBP7.98□□□□□ -1.13
SND1-205ENST00000467238 CCDC136Q96JN2 1154 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 UIMC1Q96RL1 719 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 ZNF577Q9BSK1 485 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 C11orf84Q9BUA3 381 aaPredicted RBP7.98□□□□□ -1.13
SND1-205ENST00000467238 PLVAPQ9BX97 442 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 C1QTNF1Q9BXJ1 281 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 LMAN2LQ9H0V9 348 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 TMX1Q9H3N1 280 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 NSUN3Q9H649 340 aaKnown RBP7.98□□□□□ -1.13
SND1-205ENST00000467238 C6orf50Q9HD87 102 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 TBC1D22BQ9NU19 505 aa7.98□□□□□ -1.13
SND1-205ENST00000467238 MAFBQ9Y5Q3 323 aaPredicted RBP7.98□□□□□ -1.13
SND1-205ENST00000467238 DOCK6Q96HP0 2047 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 GRM6O15303 877 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 EPB41L2O43491 1005 aaKnown RBP7.97□□□□□ -1.13
SND1-205ENST00000467238 IL9P15248 144 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 PDIA3P30101 505 aaKnown RBP7.97□□□□□ -1.13
SND1-205ENST00000467238 MAP2K3P46734 347 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 CCT2P78371 535 aaKnown RBP7.97□□□□□ -1.13
SND1-205ENST00000467238 AKAP17AQ02040 695 aaKnown RBP7.97□□□□□ -1.13
SND1-205ENST00000467238 DOC2BQ14184 412 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 TMEM266Q2M3C6 531 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 PRR16Q569H4 304 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 SWSAP1Q6NVH7 229 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 FAM43BQ6ZT52 329 aaPredicted RBP7.97□□□□□ -1.13
SND1-205ENST00000467238 FAM178BQ8IXR5 827 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 SMAP1Q8IYB5 467 aaPredicted RBP7.97□□□□□ -1.13
SND1-205ENST00000467238 CMTR2Q8IYT2 770 aaKnown RBP7.97□□□□□ -1.13
SND1-205ENST00000467238 KIAA0319LQ8IZA0 1049 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 CCDC148Q8NFR7 591 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 BICD2Q8TD16 824 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 TMEM40Q8WWA1 233 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 SLC26A6Q9BXS9 759 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 EPHX3Q9H6B9 360 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 NCOA5Q9HCD5 579 aaKnown RBP7.97□□□□□ -1.13
SND1-205ENST00000467238 ERVK-5Q9HDB9 667 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 CD320Q9NPF0 282 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 VPS54Q9P1Q0 977 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 RAPGEFL1Q9UHV5 662 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 GINS2Q9Y248 185 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 PCDHA10Q9Y5I2 948 aa7.97□□□□□ -1.13
SND1-205ENST00000467238 TDRD15B5MCY1 1934 aaKnown RBP7.97□□□□□ -1.13
SND1-205ENST00000467238 USP34Q70CQ2 3546 aa7.96□□□□□ -1.13
SND1-205ENST00000467238 H3BQ06 376 aaPredicted RBP7.96□□□□□ -1.14
SND1-205ENST00000467238 MSH4O15457 936 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 MGEA5O60502 916 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 RPS6KA5O75582 802 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 C22orf31O95567 290 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 MMP1P03956 469 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 STAG3L1P0CL83 205 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 LTBRP36941 435 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 SARSP49591 514 aaKnown RBP7.96□□□□□ -1.14
SND1-205ENST00000467238 POU4F2Q12837 409 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 CAMK1Q14012 370 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 TOB2Q14106 344 aaPredicted RBP7.96□□□□□ -1.14
SND1-205ENST00000467238 RUFY3Q7L099 469 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 FAM228AQ86W67 206 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 CKAP2LQ8IYA6 745 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 EDARADDQ8WWZ3 215 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 P2RX5Q93086 422 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 ALG13Q9NP73 1137 aaKnown RBP7.96□□□□□ -1.14
SND1-205ENST00000467238 SH3GLB2Q9NR46 395 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 GABBR1Q9UBS5 961 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 TCEAL9Q9UHQ7 104 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 PLAGL2Q9UPG8 496 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 CEP131Q9UPN4 1083 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 NOC2LQ9Y3T9 749 aaKnown RBP7.96□□□□□ -1.14
SND1-205ENST00000467238 MRPL42Q9Y6G3 142 aaKnown RBP7.96□□□□□ -1.14
SND1-205ENST00000467238 VPS13AQ96RL7 3174 aa7.96□□□□□ -1.14
SND1-205ENST00000467238 MTCL1Q9Y4B5 1905 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms