RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SETD1BQ9UPS6 1966 aaKnown RBP5.99□□□□□ -1.45
XRN1-206ENST00000467077 DNAJC9-AS1A6NH13 148 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 UNC119BA6NIH7 251 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 DIRC3C9JPN6 131 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 FSBPO95073 299 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 ESRRBO95718 433 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 SPATA31D3P0C874 917 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 WNT3AP56704 352 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 SPATA31D4Q6ZUB0 917 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 SPATC1Q76KD6 591 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 BRAPQ7Z569 592 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 C9orf106Q8NAJ2 232 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 ZBTB38Q8NAP3 1195 aaPredicted RBP5.99□□□□□ -1.45
XRN1-206ENST00000467077 OR5M3Q8NGP4 307 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 NISCHQ9Y2I1 1504 aa5.99□□□□□ -1.45
XRN1-206ENST00000467077 IGLV2-14P01704 120 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 DDX6P26196 483 aaKnown RBP eCLIP5.98□□□□□ -1.45
XRN1-206ENST00000467077 KIF11P52732 1056 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 PTTG1IPP53801 180 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 SSRP1Q08945 709 aaKnown RBP5.98□□□□□ -1.45
XRN1-206ENST00000467077 MTERF2Q49AM1 385 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 DOK3Q7L591 496 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 ZNF384Q8TF68 577 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 IL17RAQ96F46 866 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 MAGEB10Q96LZ2 347 aaPredicted RBP5.98□□□□□ -1.45
XRN1-206ENST00000467077 PCIF1Q9H4Z3 704 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 SLC52A2Q9HAB3 445 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 CHST2Q9Y4C5 530 aa5.98□□□□□ -1.45
XRN1-206ENST00000467077 PRR5-ARHGAP8B1AHC4 643 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 DIAPH1O60610 1272 aaKnown RBP5.97□□□□□ -1.45
XRN1-206ENST00000467077 RBMXL2O75526 392 aaKnown RBP5.97□□□□□ -1.45
XRN1-206ENST00000467077 NPTXRO95502 500 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 RNASE9P60153 205 aaKnown RBP5.97□□□□□ -1.45
XRN1-206ENST00000467077 NHLH1Q02575 133 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 RAB33AQ14088 237 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 TMEM177Q53S58 311 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 FOXB2Q5VYV0 432 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 SLC44A3Q8N4M1 653 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 EXOC2Q96KP1 924 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 DHRS4Q9BTZ2 278 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 OSBPL6Q9BZF3 934 aa5.97□□□□□ -1.45
XRN1-206ENST00000467077 ZFPL1O95159 310 aa5.96□□□□□ -1.46
XRN1-206ENST00000467077 HSP90B1P14625 803 aaKnown RBP5.96□□□□□ -1.46
XRN1-206ENST00000467077 HOXB6P17509 224 aaKnown RBP5.96□□□□□ -1.46
XRN1-206ENST00000467077 ZNF81P51508 661 aa5.96□□□□□ -1.46
XRN1-206ENST00000467077 ARHGEF25Q86VW2 580 aa5.96□□□□□ -1.46
XRN1-206ENST00000467077 NME9Q86XW9 330 aa5.96□□□□□ -1.46
XRN1-206ENST00000467077 KRTAP1-5Q9BYS1 174 aa5.96□□□□□ -1.46
XRN1-206ENST00000467077 ING3Q9NXR8 418 aa5.96□□□□□ -1.46
XRN1-206ENST00000467077 RNF181Q9P0P0 153 aa5.96□□□□□ -1.46
XRN1-206ENST00000467077 PFDN2Q9UHV9 154 aa5.96□□□□□ -1.46
XRN1-206ENST00000467077 MRPS23Q9Y3D9 190 aaKnown RBP5.96□□□□□ -1.46
XRN1-206ENST00000467077 TNPO3Q9Y5L0 923 aaKnown RBP5.96□□□□□ -1.46
XRN1-206ENST00000467077 ALDH1A2O94788 518 aa5.95□□□□□ -1.46
XRN1-206ENST00000467077 TP53BP2Q13625 1128 aa5.95□□□□□ -1.46
XRN1-206ENST00000467077 ASB10Q8WXI3 467 aa5.95□□□□□ -1.46
XRN1-206ENST00000467077 LSM14BQ9BX40 385 aaKnown RBP5.95□□□□□ -1.46
XRN1-206ENST00000467077 ENKD1Q9H0I2 346 aa5.95□□□□□ -1.46
XRN1-206ENST00000467077 DKK2Q9UBU2 259 aa5.95□□□□□ -1.46
XRN1-206ENST00000467077 LEFTY2O00292 366 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 PDPK1O15530 556 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 ZBTB48P10074 688 aaPredicted RBP5.94□□□□□ -1.46
XRN1-206ENST00000467077 ITGAMP11215 1152 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 ZSCAN20P17040 1043 aaPredicted RBP5.94□□□□□ -1.46
XRN1-206ENST00000467077 CASRP41180 1078 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 NHLH2Q02577 135 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 ARHGAP44Q17R89 818 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 IGSF22Q8N9C0 903 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 HIST1H2AHQ96KK5 128 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 HIST1H2AJQ99878 128 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 MTG2Q9H4K7 406 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 SPON1Q9HCB6 807 aa5.94□□□□□ -1.46
XRN1-206ENST00000467077 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.93□□□□□ -1.46
XRN1-206ENST00000467077 MATN4O95460 622 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 CFBP00751 764 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 GZMKP49863 264 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 MRPL49Q13405 166 aaKnown RBP5.93□□□□□ -1.46
XRN1-206ENST00000467077 GPR162Q16538 588 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 OTOP1Q7RTM1 612 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 UNC5BQ8IZJ1 945 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 C7orf31Q8N865 590 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 ANKS1AQ92625 1134 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 NOL10Q9BSC4 688 aaKnown RBP5.93□□□□□ -1.46
XRN1-206ENST00000467077 C1QTNF7Q9BXJ2 289 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 PITHD1Q9GZP4 211 aaPredicted RBP5.93□□□□□ -1.46
XRN1-206ENST00000467077 KMT5AQ9NQR1 393 aa5.93□□□□□ -1.46
XRN1-206ENST00000467077 KIAA1522Q9P206 1035 aaPredicted RBP5.93□□□□□ -1.46
XRN1-206ENST00000467077 USP36Q9P275 1121 aaKnown RBP5.93□□□□□ -1.46
XRN1-206ENST00000467077 SPDEFO95238 335 aa5.92□□□□□ -1.46
XRN1-206ENST00000467077 CYP17A1P05093 508 aa5.92□□□□□ -1.46
XRN1-206ENST00000467077 GAAP10253 952 aa5.92□□□□□ -1.46
XRN1-206ENST00000467077 ADCY2Q08462 1091 aa5.92□□□□□ -1.46
XRN1-206ENST00000467077 MYBPC3Q14896 1274 aa5.92□□□□□ -1.46
XRN1-206ENST00000467077 PIK3R6Q5UE93 754 aa5.92□□□□□ -1.46
XRN1-206ENST00000467077 KRTAP5-11Q6L8G4 156 aa5.92□□□□□ -1.46
XRN1-206ENST00000467077 ARMC6Q6NXE6 501 aa5.92□□□□□ -1.46
XRN1-206ENST00000467077 C1QL2Q7Z5L3 287 aa5.92□□□□□ -1.46
XRN1-206ENST00000467077 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
XRN1-206ENST00000467077 GSTCDQ8NEC7 633 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms