RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 PDCD2LQ9BRP1 358 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 TARS2Q9BW92 718 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 LSM14BQ9BX40 385 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 ZKSCAN5Q9Y2L8 839 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 PPP2R3BQ9Y5P8 575 aa4.47□□□□□ -1.69
GTF3C3-209ENST00000466862 GOLGA6L6A8MZA4 724 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 DAPK3O43293 454 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 RPS6KA4O75676 772 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 ALDH1A2O94788 518 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 PTGS2P35354 604 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 PTTG1IPP53801 180 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 MANFP55145 182 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 NPEPPSP55786 919 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 NANOS3P60323 173 aaKnown RBP4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 PCBP1Q15365 356 aaKnown RBP eCLIP4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 METTL24Q5JXM2 366 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 ESPNLQ6ZVH7 1005 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 C16orf86Q6ZW13 317 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 HOMER1Q86YM7 354 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 ZNF610Q8N9Z0 462 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 ARL8AQ96BM9 186 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 PRDM12Q9H4Q4 367 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 NRDE2Q9H7Z3 1164 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 NCDNQ9UBB6 729 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 MSRAQ9UJ68 235 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 SYNPO2Q9UMS6 1093 aa4.46□□□□□ -1.7
GTF3C3-209ENST00000466862 A0A1W2PR48 441 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 TRIM24O15164 1050 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 MAFGO15525 162 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 TMEM127O75204 238 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 ADCYAP1R1P41586 468 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 LSSP48449 732 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 GPR15P49685 360 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 WNT3AP56704 352 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 TERF2Q15554 542 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 CSRP2Q16527 193 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 C21orf62-AS1Q17RA5 79 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 CCDC178Q5BJE1 867 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 DOK3Q7L591 496 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 GPRIN1Q7Z2K8 1008 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 JAZF1Q86VZ6 243 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 ZNF575Q86XF7 245 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 NIM1KQ8IY84 436 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 ZNF276Q8N554 614 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 LILRA3Q8N6C8 439 aaPredicted RBP4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 SPTLC3Q9NUV7 552 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 FANCLQ9NW38 375 aa4.45□□□□□ -1.7
GTF3C3-209ENST00000466862 PCSK5Q92824 1860 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 PRSS38A1L453 326 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 HOXA3O43365 443 aaPredicted RBP4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 MFAP3LO75121 409 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 GNAT2P19087 354 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 ADRA1BP35368 520 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 CASRP41180 1078 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 MRPL49Q13405 166 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 DALRD3Q5D0E6 543 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 BTNL9Q6UXG8 535 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 TAS1R1Q7RTX1 841 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 GSPT2Q8IYD1 628 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 PPM1KQ8N3J5 372 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 FERMT2Q96AC1 680 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 IL17RAQ96F46 866 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 DRC1Q96MC2 740 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 TTPALQ9BTX7 342 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 ZNF768Q9H5H4 540 aaKnown RBP4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 EVLQ9UI08 416 aaPredicted RBP4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 FZD1Q9UP38 647 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 CHST2Q9Y4C5 530 aa4.44□□□□□ -1.7
GTF3C3-209ENST00000466862 ST20-MTHFSA0A0A6YYL1 179 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 GSG1L2A8MUP6 293 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 AHRRA9YTQ3 701 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 RAMP2O60895 175 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 ITGB1P05556 798 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 HK1P19367 917 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 NEK4P51957 841 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 KPNA1P52294 538 aaPredicted RBP4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 TRIM25Q14258 630 aaKnown RBP4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 VPS72Q15906 364 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 KIAA0907Q7Z7F0 614 aaPredicted RBP4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 APPBP2Q92624 585 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 HAS1Q92839 578 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 MFSD3Q96ES6 412 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 FEZ1Q99689 392 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 EMC7Q9NPA0 242 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 DKK2Q9UBU2 259 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 PLAAQ9Y263 795 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 NUMBLQ9Y6R0 609 aa4.43□□□□□ -1.7
GTF3C3-209ENST00000466862 TMEM191CA6NGB0 347 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 GZMKP49863 264 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 FAM189BP81408 668 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 PLEKHG4Q58EX7 1191 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 MBNL2Q5VZF2 373 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 CNNM4Q6P4Q7 775 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 SYT12Q8IV01 421 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 PASD1Q8IV76 773 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 DHX37Q8IY37 1157 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 GAB3Q8WWW8 586 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 GPR101Q96P66 508 aaPredicted RBP4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 WNT8AQ9H1J5 351 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms