RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 NPAS4Q8IUM7 802 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 TOP1MTQ969P6 601 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 NFKBIZQ9BYH8 718 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 PBX4Q9BYU1 374 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 TNMDQ9H2S6 317 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 NKX2-4Q9H2Z4 354 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 KCNG1Q9UIX4 513 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 USP20Q9Y2K6 914 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 ADGRA3Q8IWK6 1321 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 GBF1Q92538 1859 aa15.31■□□□□ 0.04
UBA3-209ENST00000466763 C9IYK1 514 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 ARF4P18085 180 aaPredicted RBP15.3■□□□□ 0.04
UBA3-209ENST00000466763 DNAJB2P25686 324 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 AXLP30530 894 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 ASIC1P78348 528 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 PRPF4BQ13523 1007 aaKnown RBP15.3■□□□□ 0.04
UBA3-209ENST00000466763 PCBP1Q15365 356 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBA3-209ENST00000466763 NOTUMQ6P988 496 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 FAM43BQ6ZT52 329 aaPredicted RBP15.3■□□□□ 0.04
UBA3-209ENST00000466763 CDR2LQ86X02 465 aaPredicted RBP15.3■□□□□ 0.04
UBA3-209ENST00000466763 SPIRE2Q8WWL2 714 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 RAD9AQ99638 391 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 FZD8Q9H461 694 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 GOLPH3LQ9H4A5 285 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 PCDHA11Q9Y5I1 949 aa15.3■□□□□ 0.04
UBA3-209ENST00000466763 K7ENM7 598 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 TRAK2O60296 914 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 HOXA11P31270 313 aaPredicted RBP15.29■□□□□ 0.04
UBA3-209ENST00000466763 STRN3Q13033 797 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 AMHR2Q16671 573 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 PAN2Q504Q3 1202 aaKnown RBP15.29■□□□□ 0.04
UBA3-209ENST00000466763 HERC4Q5GLZ8 1057 aaPredicted RBP15.29■□□□□ 0.04
UBA3-209ENST00000466763 SFR1Q86XK3 245 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 ECHDC2Q86YB7 292 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 FAM178BQ8IXR5 827 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 CCDC65Q8IXS2 484 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 GRAMD1CQ8IYS0 662 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 TIFAQ96CG3 184 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 DNAJC19Q96DA6 116 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 PRIMPOLQ96LW4 560 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 TRIM6Q9C030 488 aaPredicted RBP15.29■□□□□ 0.04
UBA3-209ENST00000466763 BLZF1Q9H2G9 400 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 MAGEF1Q9HAY2 307 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 PANK4Q9NVE7 773 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 KBTBD4Q9NVX7 518 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 TBC1D7Q9P0N9 293 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 HPSEQ9Y251 543 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 YBX2Q9Y2T7 364 aaKnown RBP15.29■□□□□ 0.04
UBA3-209ENST00000466763 INSL6Q9Y581 213 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 MYO9BQ13459 2157 aa15.29■□□□□ 0.04
UBA3-209ENST00000466763 PHLPP2Q6ZVD8 1323 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 H0YCG3 227 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 ACKR2O00590 384 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 NPTXRO95502 500 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 CA3P07451 260 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 SLFN14P0C7P3 912 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 FGFR1P11362 822 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 SKIP12755 728 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 GAP43P17677 238 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 CASP1P29466 404 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 NMT1P30419 496 aaKnown RBP15.28■□□□□ 0.04
UBA3-209ENST00000466763 FAM187BQ17R55 369 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 HAUS6Q7Z4H7 955 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 CNNM3Q8NE01 707 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 BICD1Q96G01 975 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 NTPCRQ9BSD7 190 aaKnown RBP15.28■□□□□ 0.04
UBA3-209ENST00000466763 APOL6Q9BWW8 343 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 EIF2AQ9BY44 585 aaKnown RBP15.28■□□□□ 0.04
UBA3-209ENST00000466763 TRIM9Q9C026 710 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 CCDC113Q9H0I3 377 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 TMEM134Q9H6X4 195 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 MRPL44Q9H9J2 332 aaKnown RBP15.28■□□□□ 0.04
UBA3-209ENST00000466763 SLC28A3Q9HAS3 691 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 FAM105AQ9NUU6 356 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 TMEM161AQ9NX61 479 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 ARHGAP28Q9P2N2 729 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 USP25Q9UHP3 1055 aa15.28■□□□□ 0.04
UBA3-209ENST00000466763 A0A0U1RQF3 1178 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 LCHNA4D1U4 455 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 TTLL13PA6NNM8 815 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 N4BP3O15049 544 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 ACTN4O43707 911 aaKnown RBP15.27■□□□□ 0.04
UBA3-209ENST00000466763 GADD45BO75293 160 aaPredicted RBP15.27■□□□□ 0.04
UBA3-209ENST00000466763 ZNF202O95125 648 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 MATR3P43243 847 aaKnown RBP eCLIP15.27■□□□□ 0.04
UBA3-209ENST00000466763 GATMP50440 423 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 FXR1P51114 621 aaKnown RBP eCLIP15.27■□□□□ 0.04
UBA3-209ENST00000466763 RAB27AP51159 221 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 ZNF131P52739 623 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 NCKAP1LP55160 1127 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 FAM189BP81408 668 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 PPP2R2DQ66LE6 453 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 ABI1Q8IZP0 508 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 TMEM161BQ8NDZ6 487 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 LPPQ93052 612 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 PGBD4Q96DM1 585 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 CCDC51Q96ER9 411 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 PAGE5Q96GU1 130 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 FAM161BQ96MY7 647 aa15.27■□□□□ 0.04
UBA3-209ENST00000466763 C7orf25Q9BPX7 421 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms