RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 MSL3Q8N5Y2 521 aaKnown RBP5.44□□□□□ -1.54
VPS13D-203ENST00000466732 WDR66Q8TBY9 1149 aa5.44□□□□□ -1.54
VPS13D-203ENST00000466732 EXTL1Q92935 676 aa5.44□□□□□ -1.54
VPS13D-203ENST00000466732 ARL8AQ96BM9 186 aa5.44□□□□□ -1.54
VPS13D-203ENST00000466732 SBNO2Q9Y2G9 1366 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 GOLGA8AA7E2F4 631 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 PRKD3O94806 890 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 FAPQ12884 760 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 ELAVL1Q15717 326 aaKnown RBP5.43□□□□□ -1.54
VPS13D-203ENST00000466732 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS13D-203ENST00000466732 NRN1LQ496H8 165 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 FKBP15Q5T1M5 1219 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 RNF207Q6ZRF8 634 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 SPATS2Q86XZ4 545 aaKnown RBP5.43□□□□□ -1.54
VPS13D-203ENST00000466732 ANKRD35Q8N283 1001 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 ATL2Q8NHH9 583 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 LMBR1Q8WVP7 490 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 MIEF2Q96C03 454 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 ENKD1Q9H0I2 346 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 SPC25Q9HBM1 224 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 EDARQ9UNE0 448 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 GIT1Q9Y2X7 761 aa5.43□□□□□ -1.54
VPS13D-203ENST00000466732 NRP1O14786 923 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 CYP27B1O15528 508 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 DNAJC6O75061 913 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 STC2O76061 302 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 AMHP03971 560 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 LTA4HP09960 611 aaKnown RBP5.42□□□□□ -1.54
VPS13D-203ENST00000466732 CASRP41180 1078 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 SCAND1P57086 179 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 UBE3CQ15386 1083 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 RNF219Q5W0B1 726 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-203ENST00000466732 C1orf210Q8IVY1 113 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 THEMISQ8N1K5 641 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-203ENST00000466732 IL17DQ8TAD2 202 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 TGFBRAP1Q8WUH2 860 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 AHCYL2Q96HN2 611 aaKnown RBP5.42□□□□□ -1.54
VPS13D-203ENST00000466732 RAX2Q96IS3 184 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 ZNF512Q96ME7 567 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-203ENST00000466732 ZNF747Q9BV97 191 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 VPS11Q9H270 941 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 DPP7Q9UHL4 492 aa5.42□□□□□ -1.54
VPS13D-203ENST00000466732 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 TMEM127O75204 238 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 CFBP00751 764 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 WNT3AP56704 352 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 MRPS9P82933 396 aaKnown RBP5.41□□□□□ -1.54
VPS13D-203ENST00000466732 ZXDAP98168 799 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 CDK17Q00537 523 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 MFSD5Q6N075 450 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 ABHD15Q6UXT9 468 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 Q6ZRM9 215 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 ELOA2Q8IYF1 753 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-203ENST00000466732 OR5M3Q8NGP4 307 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 COG1Q8WTW3 980 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 ORAI2Q96SN7 254 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 KRTAP4-2Q9BYR5 136 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 QRSL1Q9H0R6 528 aaKnown RBP5.41□□□□□ -1.54
VPS13D-203ENST00000466732 C14orf119Q9NWQ9 140 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS13D-203ENST00000466732 PHLDB1Q86UU1 1377 aa5.41□□□□□ -1.54
VPS13D-203ENST00000466732 HOXA3O43365 443 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-203ENST00000466732 PRAMEF4O60810 478 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 MEF2AQ02078 507 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-203ENST00000466732 DUSP2Q05923 314 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 CRHR2Q13324 411 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 FOXE3Q13461 319 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 RRP1BQ14684 758 aaKnown RBP5.4□□□□□ -1.54
VPS13D-203ENST00000466732 FAM214AQ32MH5 1076 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 C19orf54Q5BKX5 351 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 RNF187Q5TA31 235 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-203ENST00000466732 CRIP3Q6Q6R5 217 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 DDX42Q86XP3 938 aaKnown RBP eCLIP5.4□□□□□ -1.54
VPS13D-203ENST00000466732 GSPT2Q8IYD1 628 aaKnown RBP5.4□□□□□ -1.54
VPS13D-203ENST00000466732 TSPEARQ8WU66 669 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 SNX33Q8WV41 574 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 AUTS2Q8WXX7 1259 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 ZNF503Q96F45 646 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 AURKAIP1Q9NWT8 199 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-203ENST00000466732 MCM8Q9UJA3 840 aa5.4□□□□□ -1.54
VPS13D-203ENST00000466732 MFAP3LO75121 409 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 C1SP09871 688 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 C6P13671 934 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 GYPEP15421 78 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 TACR2P21452 398 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 CTSSP25774 331 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 GPR3P46089 330 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 SCNN1GP51170 649 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 CCT2P78371 535 aaKnown RBP5.39□□□□□ -1.55
VPS13D-203ENST00000466732 MUM1Q2TAK8 710 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 MIIPQ5JXC2 388 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 ZNF662Q6ZS27 426 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 KCNK18Q7Z418 384 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 APBB1IPQ7Z5R6 666 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-203ENST00000466732 TMPRSS6Q8IU80 811 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 Q8N1X5 172 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 MB21D1Q8N884 522 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 MDGA1Q8NFP4 955 aa5.39□□□□□ -1.55
VPS13D-203ENST00000466732 IL17RAQ96F46 866 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms