RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 LRFN2Q9ULH4 789 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 ODF2LQ9ULJ1 636 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 RWDD3Q9Y3V2 267 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 PHLPP2Q6ZVD8 1323 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 CNTNAP2Q9UHC6 1331 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 EYSQ5T1H1 3165 aa10.47□□□□□ -0.73
SDCCAG3-208ENST00000466579 INPPL1O15357 1258 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 B4GALT5O43286 388 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 ERLIN2O94905 339 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 RB1P06400 928 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 PLS3P13797 630 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 NCLP19338 710 aaKnown RBP10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 SCP2P22307 547 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 TXLNAP40222 546 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 GATMP50440 423 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 DMP1Q13316 513 aaPredicted RBP10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 BTG3Q14201 252 aaPredicted RBP10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 MCM6Q14566 821 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 E2F4Q16254 413 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 MAPK6Q16659 721 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 EPC2Q52LR7 807 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 CLLU1OSQ5K130 101 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 RRAGBQ5VZM2 374 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 TWF2Q6IBS0 349 aaKnown RBP10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 SHC4Q6S5L8 630 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 CCDC73Q6ZRK6 1079 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 GPBP1Q86WP2 473 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 TMEM192Q8IY95 271 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 CNNM3Q8NE01 707 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 DEPTORQ8TB45 409 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 MYLIPQ8WY64 445 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 C17orf80Q9BSJ5 609 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 PLVAPQ9BX97 442 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 CWH43Q9H720 699 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 POLD4Q9HCU8 107 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 LMCD1Q9NZU5 365 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 PCDHA7Q9UN72 937 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 RBM19Q9Y4C8 960 aaKnown RBP10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 PCDHB2Q9Y5E7 798 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 ATP6V1DQ9Y5K8 247 aa10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 MRPL42Q9Y6G3 142 aaKnown RBP10.46□□□□□ -0.73
SDCCAG3-208ENST00000466579 ZMYM2Q9UBW7 1377 aa10.46□□□□□ -0.74
SDCCAG3-208ENST00000466579 TTLL13PA6NNM8 815 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 H3BNC9 293 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 EDN1P05305 212 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 SSBP05455 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 PRKCBP05771 671 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 FGFR1P11362 822 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 BMPR1AP36894 532 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 NCKAP1LP55160 1127 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 PEX3P56589 373 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 KRT85P78386 507 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 NUCB2P80303 420 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 NCBP1Q09161 790 aaKnown RBP10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 GIT2Q14161 759 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 RESP18Q5W5W9 173 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 SLC27A1Q6PCB7 646 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 AGMOQ6ZNB7 445 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 LRRC55Q6ZSA7 311 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 TAS1R3Q7RTX0 852 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 SMG8Q8ND04 991 aaKnown RBP10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 TMEM161BQ8NDZ6 487 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 LEO1Q8WVC0 666 aaPredicted RBP10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 ARNTL2Q8WYA1 636 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 P2RX5Q93086 422 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 PGBD4Q96DM1 585 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 FIZ1Q96SL8 496 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 REEP2Q9BRK0 252 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 KIFC3Q9BVG8 833 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 REV3LO60673 3130 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 ATG2AQ2TAZ0 1938 aa10.45□□□□□ -0.74
SDCCAG3-208ENST00000466579 NPHP3-ACAD11A0A0J9YXS1 232 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 FAM237AA0A1B0GTK4 181 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 FRMD3A2A2Y4 597 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 TBKBP1A7MCY6 615 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 MEIS3P2A8K0S8 358 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 K7ERI5 159 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 N4BP3O15049 544 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 OFD1O75665 1012 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 MAPTP10636 758 aaKnown RBP10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 FOSL2P15408 326 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 PRPF4BQ13523 1007 aaKnown RBP10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 FOXD4L6Q3SYB3 417 aaPredicted RBP10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 NT5DC1Q5TFE4 455 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 CNNM4Q6P4Q7 775 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 FOXD4L3Q6VB84 417 aaPredicted RBP10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 SV2BQ7L1I2 683 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 FBXO22Q8NEZ5 403 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 RASSF8Q8NHQ8 419 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 DNAJC19Q96DA6 116 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 CPB2Q96IY4 423 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 GAS2L1Q99501 681 aaPredicted RBP10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 EIF2AQ9BY44 585 aaKnown RBP10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 MRPL9Q9BYD2 267 aaKnown RBP10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 SCAND2PQ9GZW5 306 aaPredicted RBP10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 CUEDC2Q9H467 287 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 ST6GALNAC4Q9H4F1 302 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 PDZD7Q9H5P4 517 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 CERS4Q9HA82 394 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 PARVGQ9HBI0 331 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms