RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 FBXO46Q6PJ61 603 aaPredicted RBP13.28□□□□□ -0.28
VPS16-206ENST00000466415 RUFY4Q6ZNE9 571 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 TAS1R3Q7RTX0 852 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 RSPH3Q86UC2 560 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 C12orf56Q8IXR9 622 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 FAM186BQ8IYM0 893 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 KIAA0319LQ8IZA0 1049 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 POMGNT1Q8WZA1 660 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 TUBGCP2Q9BSJ2 902 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 NOC4LQ9BVI4 516 aaKnown RBP13.28□□□□□ -0.28
VPS16-206ENST00000466415 NFKBIZQ9BYH8 718 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 RNF208Q9H0X6 261 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 VPS16Q9H269 839 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 IKZF4Q9H2S9 585 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 METTL14Q9HCE5 456 aaKnown RBP13.28□□□□□ -0.28
VPS16-206ENST00000466415 PRMT7Q9NVM4 692 aaPredicted RBP13.28□□□□□ -0.28
VPS16-206ENST00000466415 NOD1Q9Y239 953 aa13.28□□□□□ -0.28
VPS16-206ENST00000466415 SIP14410 1827 aa13.27□□□□□ -0.28
VPS16-206ENST00000466415 FRMPD3Q5JV73 1810 aa13.27□□□□□ -0.28
VPS16-206ENST00000466415 A0A087WZ62 844 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 A0A1B0GTH6 734 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 RPLP2P05387 115 aaKnown RBP13.27□□□□□ -0.29
VPS16-206ENST00000466415 HOXC8P31273 242 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 GPC3P51654 580 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 LBX1P52954 281 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 NLRP11P59045 1033 aaKnown RBP13.27□□□□□ -0.29
VPS16-206ENST00000466415 ZNF200P98182 395 aaPredicted RBP13.27□□□□□ -0.29
VPS16-206ENST00000466415 POU5F1BQ06416 359 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 ITGA7Q13683 1181 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 MTFR1Q15390 333 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
VPS16-206ENST00000466415 MAN2A1Q16706 1144 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 FKBP15Q5T1M5 1219 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 SLFN12LQ6IEE8 588 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 FRMD5Q7Z6J6 570 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 SESTD1Q86VW0 696 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 IRF2BP1Q8IU81 584 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 SLC9A9Q8IVB4 645 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 ZNF710Q8N1W2 664 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 XXYLT1Q8NBI6 393 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 DNAJB3Q8WWF6 145 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 DEFB118Q96PH6 123 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 FDXACB1Q9BRP7 624 aaPredicted RBP13.27□□□□□ -0.29
VPS16-206ENST00000466415 CBWD1Q9BRT8 395 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 MKNK1Q9BUB5 465 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 GCOM2Q9BZD3 368 aaPredicted RBP13.27□□□□□ -0.29
VPS16-206ENST00000466415 CCDC113Q9H0I3 377 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 PCIF1Q9H4Z3 704 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 STARD7Q9NQZ5 370 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 HSPBP1Q9NZL4 362 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 ANKFY1Q9P2R3 1169 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 ARMCX3Q9UH62 379 aaPredicted RBP13.27□□□□□ -0.29
VPS16-206ENST00000466415 GINS2Q9Y248 185 aa13.27□□□□□ -0.29
VPS16-206ENST00000466415 A0A0U1RQG5 324 aaPredicted RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 A0A1W2PQ45 241 aaPredicted RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 A0A1W2PQY0 241 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 TISP43B9A030 160 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 ANKRD63C9JTQ0 380 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 KIAA0391O15091 583 aaKnown RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 ERLIN2O94905 339 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 PIGRP01833 764 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 KRT13P13646 458 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 GARTP22102 1010 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 ADAM17P78536 824 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 MBTD1Q05BQ5 628 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 PTPN11Q06124 597 aaPredicted RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 PPP2R3AQ06190 1150 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 TMEM62Q0P6H9 643 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 PRPF4BQ13523 1007 aaKnown RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 HIC1Q14526 733 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 KIZQ2M2Z5 673 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 DCAF17Q5H9S7 520 aaPredicted RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 GDF6Q6KF10 455 aaPredicted RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 ZPBP2Q6X784 338 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 SRGAP1Q7Z6B7 1085 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 NME8Q8N427 588 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 SPC24Q8NBT2 197 aa13.26□□□□□ -0.29
VPS16-206ENST00000466415 NAP1L5Q96NT1 182 aaPredicted RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 TARS2Q9BW92 718 aaKnown RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 PAK6Q9NQU5 681 aaPredicted RBP13.26□□□□□ -0.29
VPS16-206ENST00000466415 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.26□□□□□ -0.29
VPS16-206ENST00000466415 SCN10AQ9Y5Y9 1956 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 LGALS16A8MUM7 142 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
VPS16-206ENST00000466415 DNM1LO00429 736 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 ACKR2O00590 384 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 AKAP3O75969 853 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 HARSP12081 509 aaKnown RBP13.25□□□□□ -0.29
VPS16-206ENST00000466415 CASP4P49662 377 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 MARSP56192 900 aaKnown RBP13.25□□□□□ -0.29
VPS16-206ENST00000466415 UBXN1Q04323 297 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 PTGISQ16647 500 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 VWA3BQ502W6 1294 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 TCERG1LQ5VWI1 586 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 APTXQ7Z2E3 356 aaKnown RBP13.25□□□□□ -0.29
VPS16-206ENST00000466415 TMC6Q7Z403 805 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 GPD1LQ8N335 351 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 PDLIM2Q96JY6 352 aa13.25□□□□□ -0.29
VPS16-206ENST00000466415 PRIMPOLQ96LW4 560 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms