RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 NELL1Q92832 810 aa3.41□□□□□ -1.86
CCDC93-205ENST00000466171 CAVIN3Q969G5 261 aa3.41□□□□□ -1.86
CCDC93-205ENST00000466171 MKL1Q969V6 931 aa3.41□□□□□ -1.86
CCDC93-205ENST00000466171 NDC1Q9BTX1 674 aa3.41□□□□□ -1.86
CCDC93-205ENST00000466171 COL4A3Q01955 1670 aa3.4□□□□□ -1.86
CCDC93-205ENST00000466171 A0A0A6YYK5 440 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-205ENST00000466171 ST20-MTHFSA0A0A6YYL1 179 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 CENPVL1A0A0U1RR11 272 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 PRR5-ARHGAP8B1AHC4 643 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 DIRC3C9JPN6 131 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 KIAA0355O15063 1070 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 OPHN1O60890 802 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 HLA-DOAP06340 250 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 GAAP10253 952 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 XPAP23025 273 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-205ENST00000466171 PTX3P26022 381 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-205ENST00000466171 RBM25P49756 843 aaKnown RBP3.4□□□□□ -1.87
CCDC93-205ENST00000466171 MXRA7P84157 204 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 SERINC3Q13530 473 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 DDB1Q16531 1140 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 FAM214AQ32MH5 1076 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 FNDC3BQ53EP0 1204 aaKnown RBP3.4□□□□□ -1.87
CCDC93-205ENST00000466171 C2orf27AQ580R0 203 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 KANSL1Q7Z3B3 1105 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 CXorf67Q86X51 503 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-205ENST00000466171 PASD1Q8IV76 773 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 JMYQ8N9B5 988 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 BEND2Q8NDZ0 799 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 IL17RAQ96F46 866 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 MYL10Q9BUA6 226 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 SERHL2Q9H4I8 314 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 TOMM22Q9NS69 142 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 ING3Q9NXR8 418 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 TRPM5Q9NZQ8 1165 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 B4GALT6Q9UBX8 382 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.4□□□□□ -1.87
CCDC93-205ENST00000466171 ZKSCAN5Q9Y2L8 839 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 PTCH2Q9Y6C5 1203 aa3.4□□□□□ -1.87
CCDC93-205ENST00000466171 KRTAP29-1A8MX34 341 aaPredicted RBP3.39□□□□□ -1.87
CCDC93-205ENST00000466171 NRP2O60462 931 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 SPATA31D3P0C874 917 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 SLC9A1P19634 815 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 ZEB1P37275 1124 aaPredicted RBP3.39□□□□□ -1.87
CCDC93-205ENST00000466171 GZMKP49863 264 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 BLOC1S1P78537 153 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 DUSP2Q05923 314 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 PIK3R6Q5UE93 754 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 Q6YL49 198 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 SPATA31D4Q6ZUB0 917 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 DOK3Q7L591 496 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 RD3Q7Z3Z2 195 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 GDF7Q7Z4P5 450 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 PLXDC1Q8IUK5 500 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 ARHGEF19Q8IW93 802 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 OR52N2Q8NGI0 321 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 ZNF428Q96B54 188 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 COQ10AQ96MF6 247 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 BBC3Q96PG8 261 aaPredicted RBP3.39□□□□□ -1.87
CCDC93-205ENST00000466171 WDR11Q9BZH6 1224 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 POFUT1Q9H488 388 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 ANKFY1Q9P2R3 1169 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 INSL6Q9Y581 213 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 SPO11Q9Y5K1 396 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 COX11Q9Y6N1 276 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 SPATA31A6Q5VVP1 1343 aa3.39□□□□□ -1.87
CCDC93-205ENST00000466171 TMEM200CA6NKL6 621 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 AHRRA9YTQ3 701 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 E9PSI1 815 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 RAPGEF3O95398 923 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 HKR1P10072 659 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 CD40P25942 277 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 MGAT1P26572 445 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 APOBEC3AP31941 199 aaPredicted RBP3.38□□□□□ -1.87
CCDC93-205ENST00000466171 CASRP41180 1078 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 NRG3P56975 720 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 RBL2Q08999 1139 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 MRPL49Q13405 166 aaKnown RBP3.38□□□□□ -1.87
CCDC93-205ENST00000466171 ESPNLQ6ZVH7 1005 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 CMTR2Q8IYT2 770 aaKnown RBP3.38□□□□□ -1.87
CCDC93-205ENST00000466171 CDYL2Q8N8U2 506 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 FERMT2Q96AC1 680 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 ELF4Q99607 663 aaPredicted RBP3.38□□□□□ -1.87
CCDC93-205ENST00000466171 ENKD1Q9H0I2 346 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 ZNF768Q9H5H4 540 aaKnown RBP3.38□□□□□ -1.87
CCDC93-205ENST00000466171 SYNPO2LQ9H987 977 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 SPON1Q9HCB6 807 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 AKIP1Q9NQ31 210 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 IFT57Q9NWB7 429 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 USP36Q9P275 1121 aaKnown RBP3.38□□□□□ -1.87
CCDC93-205ENST00000466171 PCDHB6Q9Y5E3 794 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 MYPNQ86TC9 1320 aa3.38□□□□□ -1.87
CCDC93-205ENST00000466171 CBX4O00257 560 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 LPXNO60711 386 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 GAS7O60861 476 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 NCR1O76036 304 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 PCDH8O95206 1070 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 NDUFA10O95299 355 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 JMJD7P0C870 316 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 BMPR1AP36894 532 aa3.37□□□□□ -1.87
CCDC93-205ENST00000466171 GPR15P49685 360 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms