RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 M0QZ92 97 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 ACKR2O00590 384 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 CSDE1O75534 798 aaKnown RBP12.25□□□□□ -0.45
VCP-204ENST00000466100 PRKCBP05771 671 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 ITGB8P26012 769 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 LPIN1Q14693 890 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 PCBP1Q15365 356 aaKnown RBP eCLIP12.25□□□□□ -0.45
VCP-204ENST00000466100 SLC39A4Q6P5W5 647 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 SASS6Q6UVJ0 657 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 C11orf57Q6ZUT1 292 aaPredicted RBP12.25□□□□□ -0.45
VCP-204ENST00000466100 TRIM43Q96BQ3 446 aaPredicted RBP12.25□□□□□ -0.45
VCP-204ENST00000466100 VWCEQ96DN2 955 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 PRIMPOLQ96LW4 560 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 SCLT1Q96NL6 688 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 MED15Q96RN5 788 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 INO80BQ9C086 356 aaPredicted RBP12.25□□□□□ -0.45
VCP-204ENST00000466100 KCTD10Q9H3F6 313 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
VCP-204ENST00000466100 PRMT7Q9NVM4 692 aaPredicted RBP12.25□□□□□ -0.45
VCP-204ENST00000466100 MAPK8IP1Q9UQF2 711 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 GINS2Q9Y248 185 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 NOC2LQ9Y3T9 749 aaKnown RBP12.25□□□□□ -0.45
VCP-204ENST00000466100 SQORQ9Y6N5 450 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 CNTNAP2Q9UHC6 1331 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 PDCD11Q14690 1871 aaKnown RBP12.25□□□□□ -0.45
VCP-204ENST00000466100 PDE4DIPQ5VU43 2346 aa12.25□□□□□ -0.45
VCP-204ENST00000466100 K7ERI5 159 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 ABLIM1O14639 778 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 B4GALT5O43286 388 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 TGFB1I1O43294 461 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 TSPAN1O60635 241 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 CCDC192P0DO97 292 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 GHRP10912 638 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 FGFR4P22455 802 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 HOXA11P31270 313 aaPredicted RBP12.24□□□□□ -0.45
VCP-204ENST00000466100 PTPRSQ13332 1948 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 MAPK6Q16659 721 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 KNOP1Q1ED39 458 aaKnown RBP12.24□□□□□ -0.45
VCP-204ENST00000466100 CENPPQ6IPU0 288 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 LRSAM1Q6UWE0 723 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 TSHZ1Q6ZSZ6 1077 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 STXBP4Q6ZWJ1 553 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 NELFCDQ8IXH7 590 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 ACCSQ96QU6 501 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 SEMA6BQ9H3T3 888 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 ERVK-5Q9HDB9 667 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 TMEM39AQ9NV64 488 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 USP20Q9Y2K6 914 aa12.24□□□□□ -0.45
VCP-204ENST00000466100 TISP43B9A030 160 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 NBNO60934 754 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 TIMP1P01033 207 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 CXCL10P02778 98 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 ARF4P18085 180 aaPredicted RBP12.23□□□□□ -0.45
VCP-204ENST00000466100 PROZP22891 400 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.45
VCP-204ENST00000466100 CCNE1P24864 410 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 CYP2C18P33260 490 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 PPP1R2P41236 205 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 PMS1P54277 932 aaKnown RBP12.23□□□□□ -0.45
VCP-204ENST00000466100 STRN3Q13033 797 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 ANO6Q4KMQ2 910 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 CT47A1Q5JQC4 288 aaPredicted RBP12.23□□□□□ -0.45
VCP-204ENST00000466100 FOXR2Q6PJQ5 311 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 ZPBP2Q6X784 338 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 ZC3H3Q8IXZ2 948 aaKnown RBP12.23□□□□□ -0.45
VCP-204ENST00000466100 USP38Q8NB14 1042 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 TMEM174Q8WUU8 243 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 DHTKD1Q96HY7 919 aaPredicted RBP12.23□□□□□ -0.45
VCP-204ENST00000466100 ACO2Q99798 780 aaKnown RBP12.23□□□□□ -0.45
VCP-204ENST00000466100 TARS2Q9BW92 718 aaKnown RBP12.23□□□□□ -0.45
VCP-204ENST00000466100 MRPL4Q9BYD3 311 aaKnown RBP12.23□□□□□ -0.45
VCP-204ENST00000466100 PPP1R12CQ9BZL4 782 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 HAPLN2Q9GZV7 340 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 DNAJC25Q9H1X3 360 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 PTPRHQ9HD43 1115 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 AGPAT5Q9NUQ2 364 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 TYW1Q9NV66 732 aaKnown RBP12.23□□□□□ -0.45
VCP-204ENST00000466100 CTNND2Q9UQB3 1225 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 STYXL1Q9Y6J8 313 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 TTC3P53804 2025 aa12.23□□□□□ -0.45
VCP-204ENST00000466100 TRIM49BA6NDI0 452 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 ANKRD63C9JTQ0 380 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 PDXKO00764 312 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 PSMA7O14818 248 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 RPS6KA5O75582 802 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 KIF20AO95235 890 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 ADSSP30520 456 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 CD52P31358 61 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 PAK1Q13153 545 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 PRPF4BQ13523 1007 aaKnown RBP12.22□□□□□ -0.45
VCP-204ENST00000466100 STIM1Q13586 685 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 NFIL3Q16649 462 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 PLEKHG4Q58EX7 1191 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 EEF1DP3Q658K8 133 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 TTI2Q6NXR4 508 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 CATSPER4Q7RTX7 472 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 C12orf56Q8IXR9 622 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
VCP-204ENST00000466100 P2RX5Q93086 422 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms