RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 NPHP3-ACAD11A0A0J9YXS1 232 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 TTLL13PA6NNM8 815 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 C5orf67F2Z3F1 127 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 H3BNC9 293 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 HOXA2O43364 376 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 SKIP12755 728 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 RAB27AP51159 221 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 PEX3P56589 373 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 DNM1Q05193 864 aaKnown RBP28.62■■■□□ 2.17
SMC4-206ENST00000465903 RAD51AP2Q09MP3 1159 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 DHX8Q14562 1220 aaKnown RBP28.62■■■□□ 2.17
SMC4-206ENST00000465903 LRRC55Q6ZSA7 311 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 RASSF8Q8NHQ8 419 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 MAFAQ8NHW3 353 aaPredicted RBP28.62■■■□□ 2.17
SMC4-206ENST00000465903 DRC1Q96MC2 740 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 CCDC39Q9UFE4 941 aa28.62■■■□□ 2.17
SMC4-206ENST00000465903 A0A1B0GUA9 196 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 RB1P06400 928 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 DDIT3P35638 169 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 NPTX2P47972 431 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 NCBP1Q09161 790 aaKnown RBP28.61■■■□□ 2.17
SMC4-206ENST00000465903 LONRF3Q496Y0 759 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 NAALADL2Q58DX5 795 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 ATL3Q6DD88 541 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 NOTUMQ6P988 496 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 SMG8Q8ND04 991 aaKnown RBP28.61■■■□□ 2.17
SMC4-206ENST00000465903 HELQQ8TDG4 1101 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 CCDC51Q96ER9 411 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 PRIMPOLQ96LW4 560 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 EIF2AQ9BY44 585 aaKnown RBP28.61■■■□□ 2.17
SMC4-206ENST00000465903 CWH43Q9H720 699 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 TYW1Q9NV66 732 aaKnown RBP28.61■■■□□ 2.17
SMC4-206ENST00000465903 RWDD3Q9Y3V2 267 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 PLXNA4Q9HCM2 1894 aa28.61■■■□□ 2.17
SMC4-206ENST00000465903 EYSQ5T1H1 3165 aa28.6■■■□□ 2.17
SMC4-206ENST00000465903 A0A087X0B3 334 aa28.6■■■□□ 2.17
SMC4-206ENST00000465903 CTNNB1P35222 781 aa28.6■■■□□ 2.17
SMC4-206ENST00000465903 CACNB1Q02641 598 aaPredicted RBP28.6■■■□□ 2.17
SMC4-206ENST00000465903 GPM6BQ13491 265 aa28.6■■■□□ 2.17
SMC4-206ENST00000465903 AGMOQ6ZNB7 445 aa28.6■■■□□ 2.17
SMC4-206ENST00000465903 GPBP1Q86WP2 473 aa28.6■■■□□ 2.17
SMC4-206ENST00000465903 CDR2LQ86X02 465 aaPredicted RBP28.6■■■□□ 2.17
SMC4-206ENST00000465903 LARP4BQ92615 738 aaKnown RBP28.6■■■□□ 2.17
SMC4-206ENST00000465903 C17orf75Q9HAS0 396 aa28.6■■■□□ 2.17
SMC4-206ENST00000465903 USP20Q9Y2K6 914 aa28.6■■■□□ 2.17
SMC4-206ENST00000465903 ACKR2O00590 384 aa28.59■■■□□ 2.17
SMC4-206ENST00000465903 PRKCBP05771 671 aa28.59■■■□□ 2.17
SMC4-206ENST00000465903 MAPK6Q16659 721 aa28.59■■■□□ 2.17
SMC4-206ENST00000465903 AXDND1Q5T1B0 1012 aaPredicted RBP28.59■■■□□ 2.17
SMC4-206ENST00000465903 NTPCRQ9BSD7 190 aaKnown RBP28.59■■■□□ 2.17
SMC4-206ENST00000465903 LMCD1Q9NZU5 365 aa28.59■■■□□ 2.17
SMC4-206ENST00000465903 RCOR1Q9UKL0 485 aa28.59■■■□□ 2.17
SMC4-206ENST00000465903 CCDC169A6NNP5 214 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 NCLP19338 710 aaKnown RBP28.58■■■□□ 2.17
SMC4-206ENST00000465903 EFNA5P52803 228 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 RRAGBQ5VZM2 374 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 TAS1R3Q7RTX0 852 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 ABI1Q8IZP0 508 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 PGBD4Q96DM1 585 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 CHAMP1Q96JM3 812 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 REEP2Q9BRK0 252 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 PLVAPQ9BX97 442 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 PANK2Q9BZ23 570 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 ARHGAP28Q9P2N2 729 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 STK17AQ9UEE5 414 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 CFAP45Q9UL16 551 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 IPPQ9Y573 584 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 CNTNAP2Q9UHC6 1331 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 REV3LO60673 3130 aa28.58■■■□□ 2.17
SMC4-206ENST00000465903 CUTAO60888 179 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 OFD1O75665 1012 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 PLS3P13797 630 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 LIG1P18858 919 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 TXLNAP40222 546 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 DMP1Q13316 513 aaPredicted RBP28.57■■■□□ 2.16
SMC4-206ENST00000465903 PRPF4BQ13523 1007 aaKnown RBP28.57■■■□□ 2.16
SMC4-206ENST00000465903 GIT2Q14161 759 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 SHC4Q6S5L8 630 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 CNNM3Q8NE01 707 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 SPIRE2Q8WWL2 714 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 RNF39Q9H2S5 420 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 TMEM134Q9H6X4 195 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 KMT5AQ9NQR1 393 aa28.57■■■□□ 2.16
SMC4-206ENST00000465903 TDRD15B5MCY1 1934 aaKnown RBP28.57■■■□□ 2.16
SMC4-206ENST00000465903 GTPBP6O43824 516 aaPredicted RBP28.56■■■□□ 2.16
SMC4-206ENST00000465903 TRIP11Q15643 1979 aa28.56■■■□□ 2.16
SMC4-206ENST00000465903 NT5DC1Q5TFE4 455 aa28.56■■■□□ 2.16
SMC4-206ENST00000465903 SLC27A1Q6PCB7 646 aa28.56■■■□□ 2.16
SMC4-206ENST00000465903 P2RX5Q93086 422 aa28.56■■■□□ 2.16
SMC4-206ENST00000465903 PDZD7Q9H5P4 517 aa28.56■■■□□ 2.16
SMC4-206ENST00000465903 ODF2LQ9ULJ1 636 aa28.56■■■□□ 2.16
SMC4-206ENST00000465903 PCDHA7Q9UN72 937 aa28.56■■■□□ 2.16
SMC4-206ENST00000465903 PRUNE2Q8WUY3 3088 aa28.55■■■□□ 2.16
SMC4-206ENST00000465903 K7ERI5 159 aa28.55■■■□□ 2.16
SMC4-206ENST00000465903 SLC16A4O15374 487 aa28.55■■■□□ 2.16
SMC4-206ENST00000465903 NPTXRO95502 500 aa28.55■■■□□ 2.16
SMC4-206ENST00000465903 CCDC85BQ15834 202 aaPredicted RBP28.55■■■□□ 2.16
SMC4-206ENST00000465903 LRRC43Q8N309 656 aa28.55■■■□□ 2.16
SMC4-206ENST00000465903 KLHL23Q8NBE8 558 aa28.55■■■□□ 2.16
SMC4-206ENST00000465903 KCNG4Q8TDN1 519 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms