RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 NAP1L2Q9ULW6 460 aaPredicted RBP13.23□□□□□ -0.29
CNOT4-208ENST00000465721 KMT2BQ9UMN6 2715 aaPredicted RBP13.22□□□□□ -0.29
CNOT4-208ENST00000465721 NOTCH4Q99466 2003 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 TRIP11Q15643 1979 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 KRBA1A5PL33 1030 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 MAFO75444 373 aaPredicted RBP13.22□□□□□ -0.29
CNOT4-208ENST00000465721 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
CNOT4-208ENST00000465721 KLRC2P26717 231 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 USP11P51784 963 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 KRT32Q14532 448 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 BMP2KLQ5H9B9 411 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 CATSPER4Q7RTX7 472 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 MIER3Q7Z3K6 550 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 MRPL10Q7Z7H8 261 aaKnown RBP13.22□□□□□ -0.29
CNOT4-208ENST00000465721 RHPN2Q8IUC4 686 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 KSR1Q8IVT5 923 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 CMASQ8NFW8 434 aaPredicted RBP13.22□□□□□ -0.29
CNOT4-208ENST00000465721 NLRP4Q96MN2 994 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 TMEM175Q9BSA9 504 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
CNOT4-208ENST00000465721 INO80BQ9C086 356 aaPredicted RBP13.22□□□□□ -0.29
CNOT4-208ENST00000465721 IFT122Q9HBG6 1241 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 MAN1C1Q9NR34 630 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 MARCH5Q9NX47 278 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 IGSF9Q9P2J2 1179 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 SUCLA2Q9P2R7 463 aaPredicted RBP13.22□□□□□ -0.29
CNOT4-208ENST00000465721 STK39Q9UEW8 545 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 PCDHB2Q9Y5E7 798 aa13.22□□□□□ -0.29
CNOT4-208ENST00000465721 COL4A3Q01955 1670 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 CLUHO75153 1309 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 TDP2O95551 362 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 HMGB1P09429 215 aaKnown RBP13.21□□□□□ -0.29
CNOT4-208ENST00000465721 DNM2P50570 870 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 IRX6P78412 446 aaPredicted RBP13.21□□□□□ -0.29
CNOT4-208ENST00000465721 Q4G0T1 1027 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 UBXN11Q5T124 520 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 PLA2G4FQ68DD2 849 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 ANO5Q75V66 913 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 RNF168Q8IYW5 571 aaPredicted RBP13.21□□□□□ -0.29
CNOT4-208ENST00000465721 ETNPPLQ8TBG4 499 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 URGCPQ8TCY9 931 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 TBCKQ8TEA7 893 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 BRF1Q92994 677 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 PGBD4Q96DM1 585 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 HERC2P3Q9BVR0 1158 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 RHOBTB2Q9BYZ6 727 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 RSAD1Q9HA92 442 aa13.21□□□□□ -0.29
CNOT4-208ENST00000465721 CYP3A7-CYP3A51PA0A087WV96 503 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 NRP1O14786 923 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 PAPLNO95428 1278 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 EFEMP2O95967 443 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 SOD2P04179 222 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 URODP06132 367 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 CFHP08603 1231 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 CYP3A7P24462 503 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 HOXA11P31270 313 aaPredicted RBP13.2□□□□□ -0.3
CNOT4-208ENST00000465721 Q6ZUG5 572 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 KCNB2Q92953 911 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 MBOAT7Q96N66 472 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 MYADMQ96S97 322 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 AGXT2Q9BYV1 514 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 MINDY3Q9H8M7 445 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 WDR6Q9NNW5 1121 aaKnown RBP13.2□□□□□ -0.3
CNOT4-208ENST00000465721 MRPL17Q9NRX2 175 aaKnown RBP13.2□□□□□ -0.3
CNOT4-208ENST00000465721 EPS15L1Q9UBC2 864 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 WNT16Q9UBV4 365 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 COL4A3BPQ9Y5P4 624 aa13.2□□□□□ -0.3
CNOT4-208ENST00000465721 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 C2CD2LO14523 706 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 INPPL1O15357 1258 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 TEX28O15482 410 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 IFNAR1P17181 557 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 FGD1P98174 961 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 AKAP17AQ02040 695 aaKnown RBP13.19□□□□□ -0.3
CNOT4-208ENST00000465721 CYP26C1Q6V0L0 522 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 TAS1R1Q7RTX1 841 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
CNOT4-208ENST00000465721 FBXL16Q8N461 479 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 ZNF707Q96C28 371 aaPredicted RBP13.19□□□□□ -0.3
CNOT4-208ENST00000465721 SLC26A6Q9BXS9 759 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 FAN1Q9Y2M0 1017 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 R4GN57 208 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
CNOT4-208ENST00000465721 MAP1BP46821 2468 aaKnown RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 M0R2N6 131 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 RFPL2O75678 378 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 GLUD1P00367 558 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 POMCP01189 267 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 LMNAP02545 664 aaKnown RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 ADH1AP07327 375 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 SRFP11831 508 aa13.18□□□□□ -0.3
CNOT4-208ENST00000465721 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-208ENST00000465721 AK2P54819 239 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms