RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 RNPEPQ9H4A4 650 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 THAP9Q9H5L6 903 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 C17orf75Q9HAS0 396 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 PAK6Q9NQU5 681 aaPredicted RBP9.72□□□□□ -0.85
UBA3-208ENST00000465627 TBC1D7Q9P0N9 293 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 LIMA1Q9UHB6 759 aaKnown RBP9.72□□□□□ -0.85
UBA3-208ENST00000465627 PTPRZ1P23471 2315 aaPredicted RBP9.72□□□□□ -0.85
UBA3-208ENST00000465627 UBE4BO95155 1302 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 ADGRA3Q8IWK6 1321 aa9.72□□□□□ -0.85
UBA3-208ENST00000465627 TRANK1O15050 2925 aa9.71□□□□□ -0.85
UBA3-208ENST00000465627 SCN10AQ9Y5Y9 1956 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 BICDL2A1A5D9 508 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 HAS3O00219 553 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 NOP56O00567 594 aaKnown RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 F2P00734 622 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 RFC5P40937 340 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 MCCD1P59942 119 aaPredicted RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 SMAD3P84022 425 aaKnown RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 CCDC173Q0VFZ6 552 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 TRIM32Q13049 653 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 STIM1Q13586 685 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 EMC2Q15006 297 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 KNOP1Q1ED39 458 aaKnown RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 EDRF1Q3B7T1 1238 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 MTERF2Q49AM1 385 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 ZC2HC1CQ53FD0 456 aaPredicted RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 ODR4Q5SWX8 454 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 C6orf132Q5T0Z8 1188 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 TAS1R3Q7RTX0 852 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 MYCT1Q8N699 235 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 TMEM161BQ8NDZ6 487 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 OR6J1Q8NGC5 347 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 KAT2BQ92831 832 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 KIFAP3Q92845 792 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 LENG1Q96BZ8 264 aaPredicted RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 ZFRQ96KR1 1074 aaKnown RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 DRC1Q96MC2 740 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 NAP1L5Q96NT1 182 aaPredicted RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 C11orf49Q9H6J7 331 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 MRPL44Q9H9J2 332 aaKnown RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 NRBP2Q9NSY0 501 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 ERAP1Q9NZ08 941 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 LARSQ9P2J5 1176 aaKnown RBP9.71□□□□□ -0.86
UBA3-208ENST00000465627 ARHGAP28Q9P2N2 729 aa9.71□□□□□ -0.86
UBA3-208ENST00000465627 FRMPD3Q5JV73 1810 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 A0A1B0GTH6 734 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 PDXKO00764 312 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 HBP1O60381 514 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 DUSP11O75319 330 aaKnown RBP9.7□□□□□ -0.86
UBA3-208ENST00000465627 PRPF6O94906 941 aaKnown RBP9.7□□□□□ -0.86
UBA3-208ENST00000465627 C22orf31O95567 290 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 GLRA2P23416 452 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 HOXC8P31273 242 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 PBX1P40424 430 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 NPTX2P47972 431 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 MARSP56192 900 aaKnown RBP9.7□□□□□ -0.86
UBA3-208ENST00000465627 GJA9P57773 515 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 ADAM17P78536 824 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 CACNB2Q08289 660 aaPredicted RBP9.7□□□□□ -0.86
UBA3-208ENST00000465627 DRP2Q13474 957 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 NR1I3Q14994 352 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 TCP11X2Q5H9J9 407 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 MARCH8Q5T0T0 291 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.7□□□□□ -0.86
UBA3-208ENST00000465627 TLK2Q86UE8 772 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 FAM178BQ8IXR5 827 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 NOC3LQ8WTT2 800 aaKnown RBP9.7□□□□□ -0.86
UBA3-208ENST00000465627 GLG1Q92896 1179 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 SRRTQ9BXP5 876 aaKnown RBP9.7□□□□□ -0.86
UBA3-208ENST00000465627 XPO4Q9C0E2 1151 aaKnown RBP9.7□□□□□ -0.86
UBA3-208ENST00000465627 IKZF4Q9H2S9 585 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 AZI2Q9H6S1 392 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 ATP6V0A4Q9HBG4 840 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 DMAC2Q9NW81 257 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 IFNKQ9P0W0 207 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 FAM184BQ9ULE4 1060 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 COL1A2P08123 1366 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 CHD7Q9P2D1 2997 aa9.7□□□□□ -0.86
UBA3-208ENST00000465627 FASNP49327 2511 aaKnown RBP9.69□□□□□ -0.86
UBA3-208ENST00000465627 EVPLQ92817 2033 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 H3BRB1 525 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 DPYSL4O14531 572 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 SEPT4O43236 478 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 DYNC1LI2O43237 492 aaPredicted RBP9.69□□□□□ -0.86
UBA3-208ENST00000465627 GAS2O43903 313 aaKnown RBP9.69□□□□□ -0.86
UBA3-208ENST00000465627 ADCY3O60266 1144 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 ADAMTS4O75173 837 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 GCNT3O95395 438 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 ZNF286BP0CG31 522 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 AKR1A1P14550 325 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 MARK3P27448 753 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 PEX3P56589 373 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 ALCAMQ13740 583 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 KRT31Q15323 416 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 DGKDQ16760 1214 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 HSP90AA4PQ58FG1 418 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 ZNF484Q5JVG2 852 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 FAM102BQ5T8I3 360 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 MFSD14CQ5VZR4 134 aa9.69□□□□□ -0.86
UBA3-208ENST00000465627 CCSAPQ6IQ19 270 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms