RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 KCTD17Q8N5Z5 321 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 TMEM161BQ8NDZ6 487 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 PANK4Q9NVE7 773 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 COL6A3P12111 3177 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 XIRP2A4UGR9 3374 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 FAM237AA0A1B0GTK4 181 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 BAIAP3O94812 1187 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 FGFR1P11362 822 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 ZNF131P52739 623 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 COASYQ13057 564 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 DSC3Q14574 896 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 MAPK6Q16659 721 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 HERC4Q5GLZ8 1057 aaPredicted RBP13.09□□□□□ -0.31
APTX-213ENST00000465003 FAM178BQ8IXR5 827 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 APOL6Q9BWW8 343 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
APTX-213ENST00000465003 LARSQ9P2J5 1176 aaKnown RBP13.09□□□□□ -0.31
APTX-213ENST00000465003 ARHGAP28Q9P2N2 729 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 SQORQ9Y6N5 450 aa13.09□□□□□ -0.31
APTX-213ENST00000465003 TTC3P53804 2025 aa13.08□□□□□ -0.31
APTX-213ENST00000465003 K7ERI5 159 aa13.08□□□□□ -0.32
APTX-213ENST00000465003 MYBP10242 640 aa13.08□□□□□ -0.32
APTX-213ENST00000465003 HARSP12081 509 aaKnown RBP13.08□□□□□ -0.32
APTX-213ENST00000465003 ZSCAN20P17040 1043 aaPredicted RBP13.08□□□□□ -0.32
APTX-213ENST00000465003 CDC42EP1Q00587 391 aa13.08□□□□□ -0.32
APTX-213ENST00000465003 FAM160A1Q05DH4 1040 aa13.08□□□□□ -0.32
APTX-213ENST00000465003 PNOCQ13519 176 aa13.08□□□□□ -0.32
APTX-213ENST00000465003 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.32
APTX-213ENST00000465003 PAN2Q504Q3 1202 aaKnown RBP13.08□□□□□ -0.32
APTX-213ENST00000465003 EEF1DP3Q658K8 133 aa13.08□□□□□ -0.32
APTX-213ENST00000465003 HAUS6Q7Z4H7 955 aa13.08□□□□□ -0.32
APTX-213ENST00000465003 IFNLR1Q8IU57 520 aaPredicted RBP13.08□□□□□ -0.32
APTX-213ENST00000465003 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.32
APTX-213ENST00000465003 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
APTX-213ENST00000465003 CUEDC2Q9H467 287 aa13.08□□□□□ -0.32
APTX-213ENST00000465003 MRPL44Q9H9J2 332 aaKnown RBP13.08□□□□□ -0.32
APTX-213ENST00000465003 YBX2Q9Y2T7 364 aaKnown RBP13.08□□□□□ -0.32
APTX-213ENST00000465003 C9IYK1 514 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 AMHP03971 560 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 MAPTP10636 758 aaKnown RBP13.07□□□□□ -0.32
APTX-213ENST00000465003 ATF7P17544 494 aaPredicted RBP13.07□□□□□ -0.32
APTX-213ENST00000465003 NCKAP1LP55160 1127 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 SEZ6Q53EL9 994 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 NT5DC1Q5TFE4 455 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 ZBTB45Q96K62 511 aaPredicted RBP13.07□□□□□ -0.32
APTX-213ENST00000465003 ZBED2Q9BTP6 218 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 TIPINQ9BVW5 301 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 NFKBIZQ9BYH8 718 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 MTIF3Q9H2K0 278 aaKnown RBP13.07□□□□□ -0.32
APTX-213ENST00000465003 FZD8Q9H461 694 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 NXF3Q9H4D5 531 aaKnown RBP13.07□□□□□ -0.32
APTX-213ENST00000465003 RGS18Q9NS28 235 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 DACT1Q9NYF0 836 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 COL4A6Q14031 1691 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 GCNT3O95395 438 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 NPTXRO95502 500 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 AFF1P51825 1210 aaKnown RBP13.07□□□□□ -0.32
APTX-213ENST00000465003 SMTNP53814 917 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 CSPP1Q1MSJ5 1256 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 HABP4Q5JVS0 413 aaKnown RBP13.07□□□□□ -0.32
APTX-213ENST00000465003 ZBTB33Q86T24 672 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 CEP120Q8N960 986 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 FAM161BQ96MY7 647 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 C7orf25Q9BPX7 421 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 FTHL17Q9BXU8 183 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 C2orf40Q9H1Z8 148 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 CXCL16Q9H2A7 254 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 PDZD7Q9H5P4 517 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 CERS4Q9HA82 394 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 SLC39A2Q9NP94 309 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 FAM105AQ9NUU6 356 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 ANKFY1Q9P2R3 1169 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 MTUS1Q9ULD2 1270 aa13.07□□□□□ -0.32
APTX-213ENST00000465003 CNTNAP2Q9UHC6 1331 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 FRMD3A2A2Y4 597 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 TLL1O43897 1013 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 KLRC4O43908 158 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 PRPF6O94906 941 aaKnown RBP13.06□□□□□ -0.32
APTX-213ENST00000465003 GJB5O95377 273 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 CA3P07451 260 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 OSTNP61366 133 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 UBE2HP62256 183 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 POU5F1BQ06416 359 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 CAMK4Q16566 473 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 SLC24A5Q71RS6 500 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 TOP1MTQ969P6 601 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 BICD1Q96G01 975 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 C17orf75Q9HAS0 396 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 LMBRD1Q9NUN5 540 aa13.06□□□□□ -0.32
APTX-213ENST00000465003 PRMT7Q9NVM4 692 aaPredicted RBP13.06□□□□□ -0.32
APTX-213ENST00000465003 ACKR2O00590 384 aa13.05□□□□□ -0.32
APTX-213ENST00000465003 AKAP5P24588 427 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms