RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 CNPP09543 421 aaKnown RBP19.37■□□□□ 0.69
HMGN1-210ENST00000464078 AOC1P19801 751 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 TDGQ13569 410 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 NPY5RQ15761 445 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 GALNT17Q6IS24 598 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 EXOC8Q8IYI6 725 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 CMASQ8NFW8 434 aaPredicted RBP19.37■□□□□ 0.69
HMGN1-210ENST00000464078 FEZF2Q8TBJ5 459 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 KLHL5Q96PQ7 755 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 GBP3Q9H0R5 595 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 RSAD1Q9HA92 442 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 KANSL3Q9P2N6 904 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 DUSP12Q9UNI6 340 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 ARID2Q68CP9 1835 aa19.37■□□□□ 0.69
HMGN1-210ENST00000464078 DDHD2O94830 711 aa19.36■□□□□ 0.69
HMGN1-210ENST00000464078 PSMA5P28066 241 aa19.36■□□□□ 0.69
HMGN1-210ENST00000464078 PPP2R5CQ13362 524 aa19.36■□□□□ 0.69
HMGN1-210ENST00000464078 LETM2Q2VYF4 491 aa19.36■□□□□ 0.69
HMGN1-210ENST00000464078 PLA2G4FQ68DD2 849 aa19.36■□□□□ 0.69
HMGN1-210ENST00000464078 SRGAP1Q7Z6B7 1085 aa19.36■□□□□ 0.69
HMGN1-210ENST00000464078 BLIDQ8IZY5 108 aa19.36■□□□□ 0.69
HMGN1-210ENST00000464078 SLC7A3Q8WY07 619 aa19.36■□□□□ 0.69
HMGN1-210ENST00000464078 DHX33Q9H6R0 707 aaKnown RBP19.36■□□□□ 0.69
HMGN1-210ENST00000464078 VAV3Q9UKW4 847 aa19.36■□□□□ 0.69
HMGN1-210ENST00000464078 INPPL1O15357 1258 aa19.35■□□□□ 0.69
HMGN1-210ENST00000464078 DKC1O60832 514 aaKnown RBP eCLIP19.35■□□□□ 0.69
HMGN1-210ENST00000464078 DEXIO95424 95 aa19.35■□□□□ 0.69
HMGN1-210ENST00000464078 KLRC2P26717 231 aa19.35■□□□□ 0.69
HMGN1-210ENST00000464078 HOXA11P31270 313 aaPredicted RBP19.35■□□□□ 0.69
HMGN1-210ENST00000464078 QARSP47897 775 aaKnown RBP19.35■□□□□ 0.69
HMGN1-210ENST00000464078 CCT2P78371 535 aaKnown RBP19.35■□□□□ 0.69
HMGN1-210ENST00000464078 UBXN11Q5T124 520 aa19.35■□□□□ 0.69
HMGN1-210ENST00000464078 CYP26C1Q6V0L0 522 aa19.35■□□□□ 0.69
HMGN1-210ENST00000464078 NKD2Q969F2 451 aaPredicted RBP19.35■□□□□ 0.69
HMGN1-210ENST00000464078 KCNMB3Q9NPA1 279 aa19.35■□□□□ 0.69
HMGN1-210ENST00000464078 MRPL17Q9NRX2 175 aaKnown RBP19.35■□□□□ 0.69
HMGN1-210ENST00000464078 IGSF9Q9P2J2 1179 aa19.35■□□□□ 0.69
HMGN1-210ENST00000464078 DDX25Q9UHL0 483 aaKnown RBP19.35■□□□□ 0.69
HMGN1-210ENST00000464078 EML1O00423 815 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 SLC37A4O43826 429 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 GAS2O43903 313 aaKnown RBP19.34■□□□□ 0.69
HMGN1-210ENST00000464078 PAPLNO95428 1278 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 EFEMP2O95967 443 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 SOD2P04179 222 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 NPR3P17342 541 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 RFC5P40937 340 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 AFF1P51825 1210 aaKnown RBP19.34■□□□□ 0.69
HMGN1-210ENST00000464078 SSRP1Q08945 709 aaKnown RBP19.34■□□□□ 0.69
HMGN1-210ENST00000464078 NONOQ15233 471 aaKnown RBP eCLIP19.34■□□□□ 0.69
HMGN1-210ENST00000464078 KRT25Q7Z3Z0 450 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 FRMD5Q7Z6J6 570 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 CCDC105Q8IYK2 499 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 RNF168Q8IYW5 571 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-210ENST00000464078 PRPF31Q8WWY3 499 aaKnown RBP19.34■□□□□ 0.69
HMGN1-210ENST00000464078 PSPC1Q8WXF1 523 aaKnown RBP19.34■□□□□ 0.69
HMGN1-210ENST00000464078 MINDY3Q9H8M7 445 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 KCNK12Q9HB15 430 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 FAN1Q9Y2M0 1017 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 DOCK8Q8NF50 2099 aa19.34■□□□□ 0.69
HMGN1-210ENST00000464078 DCHS1Q96JQ0 3298 aa19.33■□□□□ 0.69
HMGN1-210ENST00000464078 SPDYE4A6NLX3 237 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 NRP1O14786 923 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 ALDH2P05091 517 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 URODP06132 367 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 ADH1AP07327 375 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 NCLP19338 710 aaKnown RBP19.33■□□□□ 0.68
HMGN1-210ENST00000464078 NPEPPSP55786 919 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 TOB2Q14106 344 aaPredicted RBP19.33■□□□□ 0.68
HMGN1-210ENST00000464078 PCBP1Q15365 356 aaKnown RBP eCLIP19.33■□□□□ 0.68
HMGN1-210ENST00000464078 ELMSAN1Q6PJG2 1045 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 CNNM3Q8NE01 707 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 FLCNQ8NFG4 579 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 FAM20AQ96MK3 541 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 FAM193BQ96PV7 902 aaPredicted RBP19.33■□□□□ 0.68
HMGN1-210ENST00000464078 RPS6KC1Q96S38 1066 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 RTP3Q9BQQ7 232 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 HERC2P3Q9BVR0 1158 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 UBN1Q9NPG3 1134 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 MARCH5Q9NX47 278 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 DPP7Q9UHL4 492 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 SSX2IPQ9Y2D8 614 aa19.33■□□□□ 0.68
HMGN1-210ENST00000464078 C1RP00736 705 aa19.32■□□□□ 0.68
HMGN1-210ENST00000464078 SSBP05455 408 aaKnown RBP eCLIP19.32■□□□□ 0.68
HMGN1-210ENST00000464078 GCFC2P16383 781 aaKnown RBP19.32■□□□□ 0.68
HMGN1-210ENST00000464078 DSC1Q08554 894 aa19.32■□□□□ 0.68
HMGN1-210ENST00000464078 LAMTOR4Q0VGL1 99 aa19.32■□□□□ 0.68
HMGN1-210ENST00000464078 INF2Q27J81 1249 aa19.32■□□□□ 0.68
HMGN1-210ENST00000464078 ZNF579Q8NAF0 562 aaKnown RBP19.32■□□□□ 0.68
HMGN1-210ENST00000464078 MAN1C1Q9NR34 630 aa19.32■□□□□ 0.68
HMGN1-210ENST00000464078 WRAP73Q9P2S5 460 aaPredicted RBP19.32■□□□□ 0.68
HMGN1-210ENST00000464078 CPLX1O14810 134 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 N4BP1O75113 896 aaKnown RBP19.31■□□□□ 0.68
HMGN1-210ENST00000464078 REC8O95072 547 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 POMCP01189 267 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 P4HBP07237 508 aaKnown RBP19.31■□□□□ 0.68
HMGN1-210ENST00000464078 PPP4R3AQ6IN85 833 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 RUFY3Q7L099 469 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 C4orf19Q8IY42 314 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 COLGALT2Q8IYK4 626 aa19.31■□□□□ 0.68
HMGN1-210ENST00000464078 SMG8Q8ND04 991 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms