RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 BMS1Q14692 1282 aaKnown RBP20.98■□□□□ 0.95
SF3A1-205ENST00000463818 TMEM173Q86WV6 379 aaPredicted RBP20.98■□□□□ 0.95
SF3A1-205ENST00000463818 ZNF280BQ86YH2 543 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 VPS52Q8N1B4 723 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 ASAP3Q8TDY4 903 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 IGSF21Q96ID5 467 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 CCDC43Q96MW1 224 aaKnown RBP20.98■□□□□ 0.95
SF3A1-205ENST00000463818 S1PR5Q9H228 398 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 RSAD1Q9HA92 442 aa20.98■□□□□ 0.95
SF3A1-205ENST00000463818 CARNS1A5YM72 827 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 PRR33A8MZF0 331 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 CLASP2O75122 1294 aaKnown RBP20.97■□□□□ 0.95
SF3A1-205ENST00000463818 ERLIN2O94905 339 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 CA8P35219 290 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 AFF1P51825 1210 aaKnown RBP20.97■□□□□ 0.95
SF3A1-205ENST00000463818 NCBP1Q09161 790 aaKnown RBP20.97■□□□□ 0.95
SF3A1-205ENST00000463818 SYCE2Q6PIF2 218 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 DDX53Q86TM3 631 aaKnown RBP20.97■□□□□ 0.95
SF3A1-205ENST00000463818 CATSPER3Q86XQ3 398 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 IFNLR1Q8IU57 520 aaPredicted RBP20.97■□□□□ 0.95
SF3A1-205ENST00000463818 FBXO18Q8NFZ0 1043 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 URGCPQ8TCY9 931 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 SUSD6Q92537 303 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 APOL5Q9BWW9 433 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 PHF7Q9BWX1 381 aaPredicted RBP20.97■□□□□ 0.95
SF3A1-205ENST00000463818 FOXP1Q9H334 677 aaPredicted RBP20.97■□□□□ 0.95
SF3A1-205ENST00000463818 KANSL3Q9P2N6 904 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 DNAJB4Q9UDY4 337 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 MUTYHQ9UIF7 546 aa20.97■□□□□ 0.95
SF3A1-205ENST00000463818 LOC730098B7Z3J9 87 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 INO80B-WBP1J3KQ70 363 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 B4GALT3O60512 393 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 TSPAN1O60635 241 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 DDHD2O94830 711 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 NCLP19338 710 aaKnown RBP20.96■□□□□ 0.95
SF3A1-205ENST00000463818 GLRA2P23416 452 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 AXLP30530 894 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 SLC11A1P49279 550 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 HMGN5P82970 282 aaKnown RBP20.96■□□□□ 0.95
SF3A1-205ENST00000463818 CAPSQ13938 189 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 PCBP1Q15365 356 aaKnown RBP eCLIP20.96■□□□□ 0.95
SF3A1-205ENST00000463818 C8orf34Q49A92 452 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 FAM184AQ8NB25 1140 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 SMG8Q8ND04 991 aaKnown RBP20.96■□□□□ 0.95
SF3A1-205ENST00000463818 CNNM3Q8NE01 707 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 BCL7CQ8WUZ0 217 aaPredicted RBP20.96■□□□□ 0.95
SF3A1-205ENST00000463818 CPB2Q96IY4 423 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 EIF2AQ9BY44 585 aaKnown RBP20.96■□□□□ 0.95
SF3A1-205ENST00000463818 TUFT1Q9NNX1 390 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 SH2B1Q9NRF2 756 aaPredicted RBP20.96■□□□□ 0.95
SF3A1-205ENST00000463818 CNTNAP2Q9UHC6 1331 aa20.96■□□□□ 0.95
SF3A1-205ENST00000463818 MED24O75448 989 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 ALDH2P05091 517 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 ITGA4P13612 1032 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 HOXB8P17481 243 aaPredicted RBP20.95■□□□□ 0.94
SF3A1-205ENST00000463818 RBM25P49756 843 aaKnown RBP20.95■□□□□ 0.94
SF3A1-205ENST00000463818 MBTD1Q05BQ5 628 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 HERC4Q5GLZ8 1057 aaPredicted RBP20.95■□□□□ 0.94
SF3A1-205ENST00000463818 MAEAQ7L5Y9 396 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 AUTS2Q8WXX7 1259 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 CASP10Q92851 521 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 RPGRIP1Q96KN7 1286 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 FAM193BQ96PV7 902 aaPredicted RBP20.95■□□□□ 0.94
SF3A1-205ENST00000463818 POLR3CQ9BUI4 534 aaPredicted RBP20.95■□□□□ 0.94
SF3A1-205ENST00000463818 ZBP1Q9H171 429 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 POLR3FQ9H1D9 316 aaPredicted RBP20.95■□□□□ 0.94
SF3A1-205ENST00000463818 RNF39Q9H2S5 420 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 UBN1Q9NPG3 1134 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 HCN4Q9Y3Q4 1203 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 IPPQ9Y573 584 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 HCFC2Q9Y5Z7 792 aa20.95■□□□□ 0.94
SF3A1-205ENST00000463818 USO1O60763 962 aaKnown RBP20.94■□□□□ 0.94
SF3A1-205ENST00000463818 POMCP01189 267 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 OR52Z1P0C646 297 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 CTSAP10619 480 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 GNL2Q13823 731 aaKnown RBP20.94■□□□□ 0.94
SF3A1-205ENST00000463818 CBX2Q14781 532 aaPredicted RBP20.94■□□□□ 0.94
SF3A1-205ENST00000463818 AMHR2Q16671 573 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 NOTUMQ6P988 496 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 TMEM87AQ8NBN3 555 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 CCDC51Q96ER9 411 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 NACC1Q96RE7 527 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 CSRNP2Q9H175 543 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 FAN1Q9Y2M0 1017 aa20.94■□□□□ 0.94
SF3A1-205ENST00000463818 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.93■□□□□ 0.94
SF3A1-205ENST00000463818 ORC2Q13416 577 aaPredicted RBP20.93■□□□□ 0.94
SF3A1-205ENST00000463818 TTC38Q5R3I4 469 aa20.93■□□□□ 0.94
SF3A1-205ENST00000463818 ERMNQ8TAM6 284 aa20.93■□□□□ 0.94
SF3A1-205ENST00000463818 TMEM175Q9BSA9 504 aa20.93■□□□□ 0.94
SF3A1-205ENST00000463818 VN1R3Q9BXE9 311 aa20.93■□□□□ 0.94
SF3A1-205ENST00000463818 NFKBIZQ9BYH8 718 aa20.93■□□□□ 0.94
SF3A1-205ENST00000463818 GPRC5CQ9NQ84 441 aa20.93■□□□□ 0.94
SF3A1-205ENST00000463818 DBR1Q9UK59 544 aaKnown RBP20.93■□□□□ 0.94
SF3A1-205ENST00000463818 HES2Q9Y543 173 aa20.93■□□□□ 0.94
SF3A1-205ENST00000463818 IRAK3Q9Y616 596 aa20.93■□□□□ 0.94
SF3A1-205ENST00000463818 NRP1O14786 923 aa20.92■□□□□ 0.94
SF3A1-205ENST00000463818 ARF4P18085 180 aaPredicted RBP20.92■□□□□ 0.94
SF3A1-205ENST00000463818 RPA1P27694 616 aa20.92■□□□□ 0.94
SF3A1-205ENST00000463818 GIT2Q14161 759 aa20.92■□□□□ 0.94
SF3A1-205ENST00000463818 TPRNQ4KMQ1 711 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms