RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 FOXB1Q99853 325 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 IL23AQ9NPF7 189 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 SFMBT1Q9UHJ3 866 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 MCM8Q9UJA3 840 aa5.56□□□□□ -1.52
USH2A-203ENST00000463147 RBM8AQ9Y5S9 174 aaKnown RBP5.56□□□□□ -1.52
USH2A-203ENST00000463147 UBE2QL1A1L167 161 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 RASGRP1O95267 797 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 JUNP05412 331 aaKnown RBP5.55□□□□□ -1.52
USH2A-203ENST00000463147 KCNA6P17658 529 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 ID4P47928 161 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 TBX4P57082 545 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 ALDH6A1Q02252 535 aaKnown RBP5.55□□□□□ -1.52
USH2A-203ENST00000463147 MTMR1Q13613 665 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 DCAF17Q5H9S7 520 aaPredicted RBP5.55□□□□□ -1.52
USH2A-203ENST00000463147 NOSTRINQ8IVI9 506 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 BCL6BQ8N143 479 aaPredicted RBP5.55□□□□□ -1.52
USH2A-203ENST00000463147 MDGA1Q8NFP4 955 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 CYP4F11Q9HBI6 524 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 B3GALT1Q9Y5Z6 326 aa5.55□□□□□ -1.52
USH2A-203ENST00000463147 SHTN1A0MZ66 631 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 TSPAN6O43657 245 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 KPNA6O60684 536 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 VSIG10L2P0DP72 767 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 STAT4Q14765 748 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 DGKDQ16760 1214 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 TIGD2Q4W5G0 525 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 KRT40Q6A162 431 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 ABHD17CQ6PCB6 329 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 VRK3Q8IV63 474 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 DLG3Q92796 817 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 ARL8AQ96BM9 186 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 C16orf92Q96LL3 132 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 C8orf48Q96LL4 319 aa5.54□□□□□ -1.52
USH2A-203ENST00000463147 TCRBV16S1A1N1A0A5B0 115 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 SLC12A8A0AV02 714 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 C2orf78A6NCI8 922 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 KCNK3O14649 394 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 TRIM24O15164 1050 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 GPR39O43194 453 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 DAPK3O43293 454 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 PEX14O75381 377 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 RAB27AP51159 221 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 KRTAP10-11P60412 298 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 SEC23AQ15436 765 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 HECTD2Q5U5R9 776 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 PPM1KQ8N3J5 372 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 PLA2G15Q8NCC3 412 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 NELL1Q92832 810 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 BBC3Q96PG8 261 aaPredicted RBP5.53□□□□□ -1.52
USH2A-203ENST00000463147 RIPOR2Q9Y4F9 1068 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 HS3ST4Q9Y661 456 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 COL4A3Q01955 1670 aa5.53□□□□□ -1.52
USH2A-203ENST00000463147 GRID2IPA4D2P6 1211 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 INO80B-WBP1J3KQ70 363 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 OPA1O60313 960 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 EFCAB14O75071 495 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 NPTXRO95502 500 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 ASLP04424 464 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 JMJD7P0C870 316 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 GNAT2P19087 354 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 NEK4P51957 841 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 EPHB1P54762 984 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 ADAM8P78325 824 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 ROM1Q03395 351 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 DHCR24Q15392 516 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 CDCA2Q69YH5 1023 aaPredicted RBP5.52□□□□□ -1.53
USH2A-203ENST00000463147 APBB1IPQ7Z5R6 666 aaPredicted RBP5.52□□□□□ -1.53
USH2A-203ENST00000463147 WDR75Q8IWA0 830 aaKnown RBP5.52□□□□□ -1.53
USH2A-203ENST00000463147 CCDC146Q8IYE0 955 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 WDR66Q8TBY9 1149 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 COG1Q8WTW3 980 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 ST8SIA2Q92186 375 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 FAM193BQ96PV7 902 aaPredicted RBP5.52□□□□□ -1.53
USH2A-203ENST00000463147 MLST8Q9BVC4 326 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 CELF4Q9BZC1 486 aaKnown RBP5.52□□□□□ -1.53
USH2A-203ENST00000463147 INO80BQ9C086 356 aaPredicted RBP5.52□□□□□ -1.53
USH2A-203ENST00000463147 SLC5A4Q9NY91 659 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 PCDHA9Q9Y5H5 950 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 COX11Q9Y6N1 276 aa5.52□□□□□ -1.53
USH2A-203ENST00000463147 LOC102724159A0A0B4J2E5 919 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 NEMP1O14524 444 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 MAFGO15525 162 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 AKAP10O43572 662 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 CRTAMO95727 393 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 SCGB1D2O95969 90 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 GYPEP15421 78 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 BPIP17213 487 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 USP14P54578 494 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 TMEM132BQ14DG7 1078 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 PWP2Q15269 919 aaKnown RBP5.51□□□□□ -1.53
USH2A-203ENST00000463147 METTL24Q5JXM2 366 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 COLEC12Q5KU26 742 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 OLFML1Q6UWY5 402 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 C14orf80Q86SX3 495 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 ELOA2Q8IYF1 753 aaPredicted RBP5.51□□□□□ -1.53
USH2A-203ENST00000463147 AHI1Q8N157 1196 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 OR5AN1Q8NGI8 311 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 PMM1Q92871 262 aa5.51□□□□□ -1.53
USH2A-203ENST00000463147 ZNF512Q96ME7 567 aaPredicted RBP5.51□□□□□ -1.53
USH2A-203ENST00000463147 RTFDC1Q9BY42 306 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms