RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 TTC7BQ86TV6 843 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 RHOT1Q8IXI2 618 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 RAB24Q969Q5 203 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 TOE1Q96GM8 510 aaKnown RBP4.66□□□□□ -1.66
GPNMB-205ENST00000463011 APIPQ96GX9 242 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 C7orf25Q9BPX7 421 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 LRRC27Q9C0I9 530 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 C14orf93Q9H972 538 aaKnown RBP4.66□□□□□ -1.66
GPNMB-205ENST00000463011 ZMAT3Q9HA38 289 aaKnown RBP4.66□□□□□ -1.66
GPNMB-205ENST00000463011 CERS4Q9HA82 394 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 ATP6V0A4Q9HBG4 840 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 DCP1AQ9NPI6 582 aaPredicted RBP4.66□□□□□ -1.66
GPNMB-205ENST00000463011 RBM12Q9NTZ6 932 aaKnown RBP4.66□□□□□ -1.66
GPNMB-205ENST00000463011 C9orf78Q9NZ63 289 aaPredicted RBP4.66□□□□□ -1.66
GPNMB-205ENST00000463011 SCOCQ9UIL1 159 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 MAGEL2Q9UJ55 1249 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 GTF2A1LQ9UNN4 478 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 SLC5A6Q9Y289 635 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 PCDHA3Q9Y5H8 950 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 HCFC2Q9Y5Z7 792 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 DGKBQ9Y6T7 804 aa4.66□□□□□ -1.66
GPNMB-205ENST00000463011 ZNF839A8K0R7 811 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 H3BUI4 141 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 SRGAP3O43295 1099 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 SLC26A4O43511 780 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 TGFB1P01137 390 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 RPLP2P05387 115 aaKnown RBP4.65□□□□□ -1.67
GPNMB-205ENST00000463011 ENO2P09104 434 aaPredicted RBP4.65□□□□□ -1.67
GPNMB-205ENST00000463011 H2AFB1P0C5Y9 115 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 H2AFB2P0C5Z0 115 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 APEX1P27695 318 aaKnown RBP4.65□□□□□ -1.67
GPNMB-205ENST00000463011 STT3AP46977 705 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 GPR15P49685 360 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 PRR5P85299 388 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 TNFAIP2Q03169 654 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 ZNF543Q08ER8 600 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 MGAT5Q09328 741 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 NR0B2Q15466 257 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 WDR78Q5VTH9 848 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 IZUMO3Q5VZ72 239 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 CCDC70Q6NSX1 233 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 TEPPQ6URK8 271 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 CLEC4GQ6UXB4 293 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 STK11IPQ8N1F8 1099 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 SH2D3CQ8N5H7 860 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 WDR48Q8TAF3 677 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 SHISA4Q96DD7 197 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 CLPTM1LQ96KA5 538 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 HIST1H2AHQ96KK5 128 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 HIST1H2AJQ99878 128 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 FDXACB1Q9BRP7 624 aaPredicted RBP4.65□□□□□ -1.67
GPNMB-205ENST00000463011 PITHD1Q9GZP4 211 aaPredicted RBP4.65□□□□□ -1.67
GPNMB-205ENST00000463011 BTBD1Q9H0C5 482 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 KIAA1586Q9HCI6 787 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 TNFRSF12AQ9NP84 129 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.65□□□□□ -1.67
GPNMB-205ENST00000463011 USP19O94966 1318 aa4.65□□□□□ -1.67
GPNMB-205ENST00000463011 hCG_1642624A0A1W2PR95 340 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 POM121BA6NF01 834 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 NUDT19A8MXV4 375 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 SLC16A6O15403 523 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 PHGDHO43175 533 aaKnown RBP4.64□□□□□ -1.67
GPNMB-205ENST00000463011 NRP2O60462 931 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 HPXP02790 462 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 KITP10721 976 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 ADSLP30566 484 aaPredicted RBP4.64□□□□□ -1.67
GPNMB-205ENST00000463011 HK3P52790 923 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 MAPK10P53779 464 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 NRG3P56975 720 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 NKX6-1P78426 367 aaPredicted RBP4.64□□□□□ -1.67
GPNMB-205ENST00000463011 MGAT2Q10469 447 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 NFATC3Q12968 1075 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 NOGQ13253 232 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 SEPT2Q15019 361 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 ELF2Q15723 593 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 MSMPQ1L6U9 139 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 SLC4A8Q2Y0W8 1093 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 KHDC1Q4VXA5 237 aaKnown RBP4.64□□□□□ -1.67
GPNMB-205ENST00000463011 TMC5Q6UXY8 1006 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 LIPIQ6XZB0 460 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 LDHAL6AQ6ZMR3 332 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 PROSER1Q86XN7 944 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 LIX1LQ8IVB5 337 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 GLB1L2Q8IW92 636 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 FAM126BQ8IXS8 530 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 MYCT1Q8N699 235 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 SPATA5Q8NB90 893 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 C3orf20Q8ND61 904 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 GPR156Q8NFN8 814 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 IL31RAQ8NI17 732 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 IGDCC4Q8TDY8 1250 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 NSUN6Q8TEA1 469 aaKnown RBP4.64□□□□□ -1.67
GPNMB-205ENST00000463011 SLC35A4Q96G79 324 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 CCDC120Q96HB5 630 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 DMRTA2Q96SC8 542 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 VRK1Q99986 396 aaPredicted RBP4.64□□□□□ -1.67
GPNMB-205ENST00000463011 BTBD2Q9BX70 525 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 STARD7Q9NQZ5 370 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 LMBRD1Q9NUN5 540 aa4.64□□□□□ -1.67
GPNMB-205ENST00000463011 KCMF1Q9P0J7 381 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms