RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ZSWIM2Q8NEG5 633 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 NPLOC4Q8TAT6 608 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 CCDC102AQ96A19 550 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 SPAG5Q96R06 1193 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 NTPCRQ9BSD7 190 aaKnown RBP15.77■□□□□ 0.12
HDAC6-213ENST00000462730 AZI2Q9H6S1 392 aa15.77■□□□□ 0.12
HDAC6-213ENST00000462730 KRT86O43790 486 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 LCA5LO95447 670 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 SNAI1O95863 264 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 ARID5AQ03989 594 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 CBWD6Q4V339 395 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 CBWD3Q5JTY5 395 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 CBWD5Q5RIA9 395 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 GJC2Q5T442 439 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 C17orf99Q6UX52 265 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 INTS8Q75QN2 995 aaKnown RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 TMEM143Q96AN5 459 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 NIFKQ9BYG3 293 aaKnown RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 IFIH1Q9BYX4 1025 aaKnown RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 LACRTQ9GZZ8 138 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 AIPL1Q9NZN9 384 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 AJAP1Q9UKB5 411 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 PCDHA13Q9Y5I0 950 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 EMSYQ7Z589 1322 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 CTAGE9A4FU28 777 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 TMEM88BA6NKF7 163 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 LGR5O75473 907 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 MARK3P27448 753 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 ADCYAP1R1P41586 468 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 VAMP7P51809 220 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 GRM1Q13255 1194 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 ENOX2Q16206 610 aaKnown RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 ASTE1Q2TB18 679 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 GJB7Q6PEY0 223 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 GLG1Q92896 1179 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 ZIC5Q96T25 663 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 TINF2Q9BSI4 451 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 INTS2Q9H0H0 1204 aaKnown RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 DHX33Q9H6R0 707 aaKnown RBP15.76■□□□□ 0.11
HDAC6-213ENST00000462730 NRBP2Q9NSY0 501 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 FBXL5Q9UKA1 691 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 MRFAP1Q9Y605 127 aa15.76■□□□□ 0.11
HDAC6-213ENST00000462730 CCDC66A2RUB6 948 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 GOLGA8IPA6NC78 632 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 GOLGA8JA6NMD2 632 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 MAPK13O15264 365 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 ARHGAP1Q07960 439 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 KLHL30Q0D2K2 578 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 CRHR2Q13324 411 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 MORN1Q5T089 497 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 IQCEQ6IPM2 695 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-213ENST00000462730 ASAP3Q8TDY4 903 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 CEP89Q96ST8 783 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 NAPGQ99747 312 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-213ENST00000462730 TSGA10Q9BZW7 698 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 ZFYVE28Q9HCC9 887 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 MYO6Q9UM54 1294 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 DOCK3Q8IZD9 2030 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-213ENST00000462730 RBM47A0AV96 593 aaKnown RBP15.75■□□□□ 0.11
HDAC6-213ENST00000462730 H0YCG3 227 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 ADRB2P07550 413 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 ADSSP30520 456 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 RFC5P40937 340 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 DLG4P78352 724 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 GFPT1Q06210 699 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-213ENST00000462730 KIF5AQ12840 1032 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 SLC39A4Q6P5W5 647 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 EHBP1Q8NDI1 1231 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 MNS1Q8NEH6 495 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 SLC7A3Q8WY07 619 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 SAAL1Q96ER3 474 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 BICD1Q96G01 975 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 FAM167AQ96KS9 214 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 CARD6Q9BX69 1037 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 SLC5A4Q9NY91 659 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 ARHGAP28Q9P2N2 729 aa15.75■□□□□ 0.11
HDAC6-213ENST00000462730 CNGA1P29973 690 aa15.74■□□□□ 0.11
HDAC6-213ENST00000462730 MAGEA1P43355 309 aa15.74■□□□□ 0.11
HDAC6-213ENST00000462730 CLCN6P51797 869 aa15.74■□□□□ 0.11
HDAC6-213ENST00000462730 JAM2P57087 298 aa15.74■□□□□ 0.11
HDAC6-213ENST00000462730 MAP2K5Q13163 448 aa15.74■□□□□ 0.11
HDAC6-213ENST00000462730 BMS1Q14692 1282 aaKnown RBP15.74■□□□□ 0.11
HDAC6-213ENST00000462730 TARBP2Q15633 366 aaKnown RBP15.74■□□□□ 0.11
HDAC6-213ENST00000462730 TAS1R3Q7RTX0 852 aa15.74■□□□□ 0.11
HDAC6-213ENST00000462730 PLPPR4Q7Z2D5 763 aa15.74■□□□□ 0.11
HDAC6-213ENST00000462730 HHIPL1Q96JK4 782 aa15.74■□□□□ 0.11
HDAC6-213ENST00000462730 HNRNPDLO14979 420 aaKnown RBP15.73■□□□□ 0.11
HDAC6-213ENST00000462730 N4BP1O75113 896 aaKnown RBP15.73■□□□□ 0.11
HDAC6-213ENST00000462730 GH1P01241 217 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 GLRA2P23416 452 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 ARL2P36404 184 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 LAMC2Q13753 1193 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 C1orf220Q5T0J3 134 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 CBWD2Q8IUF1 395 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 PLEKHO2Q8TD55 490 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 ABHD16BQ9H3Z7 469 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 KCNG1Q9UIX4 513 aa15.73■□□□□ 0.11
HDAC6-213ENST00000462730 DUSP10Q9Y6W6 482 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms