RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 CATSPER4Q7RTX7 472 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 REXO1Q8N1G1 1221 aaKnown RBP13.11□□□□□ -0.31
PCCB-203ENST00000462542 RDM1Q8NG50 284 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 SMG7Q92540 1137 aaKnown RBP13.11□□□□□ -0.31
PCCB-203ENST00000462542 CNTNAP3BQ96NU0 1288 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 MYADMQ96S97 322 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 JPH2Q9BR39 696 aaPredicted RBP13.11□□□□□ -0.31
PCCB-203ENST00000462542 CNTNAP3Q9BZ76 1288 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 RXFP1Q9HBX9 757 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
PCCB-203ENST00000462542 FBXO4Q9UKT5 387 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 PCDHB2Q9Y5E7 798 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 EPG5Q9HCE0 2579 aa13.11□□□□□ -0.31
PCCB-203ENST00000462542 NCOR2Q9Y618 2525 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 FANCMQ8IYD8 2048 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 CEP250Q9BV73 2442 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 KMT2BQ9UMN6 2715 aaPredicted RBP13.1□□□□□ -0.31
PCCB-203ENST00000462542 MEIS3P2A8K0S8 358 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 PRR5-ARHGAP8B1AHC4 643 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 C2CD2LO14523 706 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 TEX28O15482 410 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 GAS7O60861 476 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 MAFO75444 373 aaPredicted RBP13.1□□□□□ -0.31
PCCB-203ENST00000462542 USP11P51784 963 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 RCAN1P53805 252 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 ARHGAP8P85298 464 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 DRP2Q13474 957 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
PCCB-203ENST00000462542 VARS2Q5ST30 1063 aaKnown RBP13.1□□□□□ -0.31
PCCB-203ENST00000462542 KIAA0319Q5VV43 1072 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 RHPN2Q8IUC4 686 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 CNNM3Q8NE01 707 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 PJA1Q8NG27 643 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 BICD2Q8TD16 824 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
PCCB-203ENST00000462542 HERC2P3Q9BVR0 1158 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 LSG1Q9H089 658 aaKnown RBP13.1□□□□□ -0.31
PCCB-203ENST00000462542 NT5C3AQ9H0P0 336 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 RSAD1Q9HA92 442 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 PIDD1Q9HB75 910 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 ZDHHC7Q9NXF8 308 aa13.1□□□□□ -0.31
PCCB-203ENST00000462542 CCDC196A0A1B0GTZ2 297 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 SPTLC1O15269 473 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 GAS2O43903 313 aaKnown RBP13.09□□□□□ -0.31
PCCB-203ENST00000462542 NR1I2O75469 434 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 KRT37O76014 449 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 MTERF2Q49AM1 385 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 RNF20Q5VTR2 975 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 EXOC8Q8IYI6 725 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 ATRIPQ8WXE1 791 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 SLC5A5Q92911 643 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 PHKBQ93100 1093 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 LENG9Q96B70 501 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 ZNF707Q96C28 371 aaPredicted RBP13.09□□□□□ -0.31
PCCB-203ENST00000462542 CEP89Q96ST8 783 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 TEKT3Q9BXF9 490 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 BCO2Q9BYV7 579 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 OSBPL6Q9BZF3 934 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 PRKD2Q9BZL6 878 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 AGPAT5Q9NUQ2 364 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 NCDNQ9UBB6 729 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 SEPT9Q9UHD8 586 aaPredicted RBP13.09□□□□□ -0.31
PCCB-203ENST00000462542 BRPF3Q9ULD4 1205 aa13.09□□□□□ -0.31
PCCB-203ENST00000462542 CACNA1IQ9P0X4 2223 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 KANSL1LA0AUZ9 987 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 MSH4O15457 936 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 B4GALT3O60512 393 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 RFPL2O75678 378 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 MAGEA9P43362 315 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 GLUD2P49448 558 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 EXOSC10Q01780 885 aaKnown RBP13.08□□□□□ -0.32
PCCB-203ENST00000462542 HTR4Q13639 388 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 UGCGQ16739 394 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 LRCH2Q5VUJ6 765 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 DHX32Q7L7V1 743 aaKnown RBP13.08□□□□□ -0.32
PCCB-203ENST00000462542 TAS1R1Q7RTX1 841 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 MAML2Q8IZL2 1156 aaPredicted RBP13.08□□□□□ -0.32
PCCB-203ENST00000462542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCCB-203ENST00000462542 FAM217BQ9NTX9 383 aaPredicted RBP13.08□□□□□ -0.32
PCCB-203ENST00000462542 PCDHGA2Q9Y5H1 932 aa13.08□□□□□ -0.32
PCCB-203ENST00000462542 GOLGA8AA7E2F4 631 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 DDX11L8A8MPP1 907 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 GOLGA8BA8MQT2 603 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 LAMTOR5O43504 91 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 STBD1O95210 358 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 EFEMP2O95967 443 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 POMCP01189 267 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 GLULP15104 373 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 NCLP19338 710 aaKnown RBP13.07□□□□□ -0.32
PCCB-203ENST00000462542 CDC27P30260 824 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 OR1G1P47890 313 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 AFF1P51825 1210 aaKnown RBP13.07□□□□□ -0.32
PCCB-203ENST00000462542 ATXN1P54253 815 aaKnown RBP13.07□□□□□ -0.32
PCCB-203ENST00000462542 DSG1Q02413 1049 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 CREMQ03060 361 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 PRKCQQ04759 706 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms