RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RNPC3Q96LT9 517 aaKnown RBP12.99□□□□□ -0.33
CPNE1-221ENST00000462352 PRIMPOLQ96LW4 560 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 ADAM2Q99965 735 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 MTIF3Q9H2K0 278 aaKnown RBP12.99□□□□□ -0.33
CPNE1-221ENST00000462352 TMEM134Q9H6X4 195 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 CHST12Q9NRB3 414 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 OLFML3Q9NRN5 406 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 AGPAT5Q9NUQ2 364 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 TBC1D7Q9P0N9 293 aa12.99□□□□□ -0.33
CPNE1-221ENST00000462352 PIN4Q9Y237 131 aaKnown RBP12.99□□□□□ -0.33
CPNE1-221ENST00000462352 CNTNAP2Q9UHC6 1331 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 TTLL13PA6NNM8 815 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 ACKR2O00590 384 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 ENPP3O14638 875 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 KLRC4O43908 158 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 EDN1P05305 212 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 ARF4P18085 180 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-221ENST00000462352 AXLP30530 894 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 HOXA11P31270 313 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-221ENST00000462352 KCNJ6P48051 423 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 EHHADHQ08426 723 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 DPYDQ12882 1025 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 PNOCQ13519 176 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 POSTNQ15063 836 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.98□□□□□ -0.33
CPNE1-221ENST00000462352 ZNF720Q7Z2F6 126 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 TDHQ8IZJ6 230 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 SLC17A8Q8NDX2 589 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 KCNN1Q92952 543 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 HPS3Q969F9 1004 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 CPB2Q96IY4 423 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-221ENST00000462352 ST6GALNAC4Q9H4F1 302 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 MRPL44Q9H9J2 332 aaKnown RBP12.98□□□□□ -0.33
CPNE1-221ENST00000462352 RGS18Q9NS28 235 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 COLQQ9Y215 455 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-221ENST00000462352 USP20Q9Y2K6 914 aa12.98□□□□□ -0.33
CPNE1-221ENST00000462352 RANBP2P49792 3224 aaKnown RBP12.97□□□□□ -0.33
CPNE1-221ENST00000462352 MICAL3Q7RTP6 2002 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 RPN1P04843 607 aaKnown RBP12.97□□□□□ -0.33
CPNE1-221ENST00000462352 SCP2P22307 547 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 DEFB103AP81534 67 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 GTF2BQ00403 316 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 NCBP1Q09161 790 aaKnown RBP12.97□□□□□ -0.33
CPNE1-221ENST00000462352 STRN3Q13033 797 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 PRPF4BQ13523 1007 aaKnown RBP12.97□□□□□ -0.33
CPNE1-221ENST00000462352 ZC2HC1CQ53FD0 456 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-221ENST00000462352 NT5DC1Q5TFE4 455 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 TWF2Q6IBS0 349 aaKnown RBP12.97□□□□□ -0.33
CPNE1-221ENST00000462352 ELOA2Q8IYF1 753 aaPredicted RBP12.97□□□□□ -0.33
CPNE1-221ENST00000462352 MYOCDQ8IZQ8 938 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 STRA6Q9BX79 667 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 FGFBP2Q9BYJ0 223 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 C1orf112Q9NSG2 853 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 SLC4A7Q9Y6M7 1214 aa12.97□□□□□ -0.33
CPNE1-221ENST00000462352 A0A1B0GUA9 196 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 C9IYK1 514 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 PPP1R37O75864 691 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 GCNT3O95395 438 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 AMHP03971 560 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 MYBP10242 640 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 ABCD1P33897 745 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 MCM4P33991 863 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 CASP5P51878 434 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 FAM26FQ5R3K3 315 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 UBXN11Q5T124 520 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 NOTUMQ6P988 496 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 SLC24A5Q71RS6 500 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 CDR2LQ86X02 465 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-221ENST00000462352 GLIS3Q8NEA6 775 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-221ENST00000462352 CCDC51Q96ER9 411 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 SLC9A7Q96T83 725 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 TARS2Q9BW92 718 aaKnown RBP12.96□□□□□ -0.33
CPNE1-221ENST00000462352 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 MRPL4Q9BYD3 311 aaKnown RBP12.96□□□□□ -0.33
CPNE1-221ENST00000462352 EXOC1Q9NV70 894 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 HOOK1Q9UJC3 728 aaKnown RBP12.96□□□□□ -0.33
CPNE1-221ENST00000462352 TBX20Q9UMR3 447 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
CPNE1-221ENST00000462352 A0A0U1RQF3 1178 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 A0A1W2PPC1 479 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 N4BP3O15049 544 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 ATP2A2P16615 1042 aaKnown RBP12.95□□□□□ -0.34
CPNE1-221ENST00000462352 IBSPP21815 317 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-221ENST00000462352 SARSP49591 514 aaKnown RBP12.95□□□□□ -0.34
CPNE1-221ENST00000462352 ALCAMQ13740 583 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 ATF7IP2Q5U623 682 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 SLC27A1Q6PCB7 646 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 TMCO2Q7Z6W1 182 aaPredicted RBP12.95□□□□□ -0.34
CPNE1-221ENST00000462352 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 GPT2Q8TD30 523 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 TOP1MTQ969P6 601 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
CPNE1-221ENST00000462352 HVCN1Q96D96 273 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 ACO2Q99798 780 aaKnown RBP12.95□□□□□ -0.34
CPNE1-221ENST00000462352 EIF2AQ9BY44 585 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms