RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PRIMPOLQ96LW4 560 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 PRMT7Q9NVM4 692 aaPredicted RBP17.51■□□□□ 0.39
ERCC3-206ENST00000462306 HCSTQ9UBK5 93 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 RWDD3Q9Y3V2 267 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 MTCH2Q9Y6C9 303 aa17.51■□□□□ 0.39
ERCC3-206ENST00000462306 COL4A4P53420 1690 aaPredicted RBP17.51■□□□□ 0.39
ERCC3-206ENST00000462306 RALGAPA2Q2PPJ7 1873 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 NPHP3-ACAD11A0A0J9YXS1 232 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 A0A1B0GUA9 196 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 TTLL13PA6NNM8 815 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 MEIS3P2A8K0S8 358 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 SFI1A8K8P3 1242 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 H3BNC9 293 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 EDN1P05305 212 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 RB1P06400 928 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 CTNNB1P35222 781 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 DDIT3P35638 169 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 DHX8Q14562 1220 aaKnown RBP17.5■□□□□ 0.39
ERCC3-206ENST00000462306 NAALADL2Q58DX5 795 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 LRRC55Q6ZSA7 311 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 GPBP1Q86WP2 473 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 SMG8Q8ND04 991 aaKnown RBP17.5■□□□□ 0.39
ERCC3-206ENST00000462306 HELQQ8TDG4 1101 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 LARP4BQ92615 738 aaKnown RBP17.5■□□□□ 0.39
ERCC3-206ENST00000462306 EIF2AQ9BY44 585 aaKnown RBP17.5■□□□□ 0.39
ERCC3-206ENST00000462306 CWH43Q9H720 699 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 C17orf75Q9HAS0 396 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 TYW1Q9NV66 732 aaKnown RBP17.5■□□□□ 0.39
ERCC3-206ENST00000462306 CCDC39Q9UFE4 941 aa17.5■□□□□ 0.39
ERCC3-206ENST00000462306 CNTNAP2Q9UHC6 1331 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 A0A087X0B3 334 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 ACKR2O00590 384 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 PRKCBP05771 671 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 TXLNAP40222 546 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 EFNA5P52803 228 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
ERCC3-206ENST00000462306 DMP1Q13316 513 aaPredicted RBP17.49■□□□□ 0.39
ERCC3-206ENST00000462306 MAPK6Q16659 721 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 LONRF3Q496Y0 759 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 AXDND1Q5T1B0 1012 aaPredicted RBP17.49■□□□□ 0.39
ERCC3-206ENST00000462306 RRAGBQ5VZM2 374 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 AGMOQ6ZNB7 445 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 KCNG4Q8TDN1 519 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 REEP2Q9BRK0 252 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 NTPCRQ9BSD7 190 aaKnown RBP17.49■□□□□ 0.39
ERCC3-206ENST00000462306 PLVAPQ9BX97 442 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 ARHGAP28Q9P2N2 729 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 STK17AQ9UEE5 414 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 RCOR1Q9UKL0 485 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 CFAP45Q9UL16 551 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 USP20Q9Y2K6 914 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 COL6A3P12111 3177 aa17.49■□□□□ 0.39
ERCC3-206ENST00000462306 CCDC169A6NNP5 214 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 CUTAO60888 179 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 OFD1O75665 1012 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 PLS3P13797 630 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
ERCC3-206ENST00000462306 GPM6BQ13491 265 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 PRPF4BQ13523 1007 aaKnown RBP17.48■□□□□ 0.39
ERCC3-206ENST00000462306 GIT2Q14161 759 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 SLC27A1Q6PCB7 646 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 SHC4Q6S5L8 630 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 CDR2LQ86X02 465 aaPredicted RBP17.48■□□□□ 0.39
ERCC3-206ENST00000462306 ABI1Q8IZP0 508 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 CNNM3Q8NE01 707 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 SPIRE2Q8WWL2 714 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 P2RX5Q93086 422 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 PGBD4Q96DM1 585 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 CHAMP1Q96JM3 812 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 PANK2Q9BZ23 570 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 KMT5AQ9NQR1 393 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 LMCD1Q9NZU5 365 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 ODF2LQ9ULJ1 636 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 IPPQ9Y573 584 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 KIAA1671Q9BY89 1806 aa17.48■□□□□ 0.39
ERCC3-206ENST00000462306 PRRC2BQ5JSZ5 2229 aaKnown RBP17.47■□□□□ 0.39
ERCC3-206ENST00000462306 K7ERI5 159 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 SLC16A4O15374 487 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 GTPBP6O43824 516 aaPredicted RBP17.47■□□□□ 0.39
ERCC3-206ENST00000462306 LIG1P18858 919 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 NT5DC1Q5TFE4 455 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 GLB1LQ6UWU2 654 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 CCDC73Q6ZRK6 1079 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 TAS1R3Q7RTX0 852 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 LRRC43Q8N309 656 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 RSPH1Q8WYR4 309 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 C11orf84Q9BUA3 381 aaPredicted RBP17.47■□□□□ 0.39
ERCC3-206ENST00000462306 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 PDZD7Q9H5P4 517 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 TMEM134Q9H6X4 195 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 PCDHA7Q9UN72 937 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
ERCC3-206ENST00000462306 HES2Q9Y543 173 aa17.47■□□□□ 0.39
ERCC3-206ENST00000462306 GRM6O15303 877 aa17.46■□□□□ 0.39
ERCC3-206ENST00000462306 NPTXRO95502 500 aa17.46■□□□□ 0.39
ERCC3-206ENST00000462306 ZNF131P52739 623 aa17.46■□□□□ 0.39
ERCC3-206ENST00000462306 NOMO2Q5JPE7 1267 aa17.46■□□□□ 0.39
ERCC3-206ENST00000462306 KLHL23Q8NBE8 558 aa17.46■□□□□ 0.39
ERCC3-206ENST00000462306 COLGALT1Q8NBJ5 622 aa17.46■□□□□ 0.39
ERCC3-206ENST00000462306 TMEM161BQ8NDZ6 487 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms