RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 UBL4BQ8N7F7 174 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 RDH13Q8NBN7 331 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 AGPAT3Q9NRZ7 376 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 RASGRF2O14827 1237 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 CHMP2AO43633 222 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 FTLP02792 175 aaPredicted RBP19.87■□□□□ 0.77
HPS3-204ENST00000462030 C11orf63Q6NUN7 778 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 AMNQ9BXJ7 453 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 PARVGQ9HBI0 331 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 FRMD4BQ9Y2L6 1034 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 MIF4GDA9UHW6 222 aaKnown RBP19.87■□□□□ 0.77
HPS3-204ENST00000462030 PODXLO00592 558 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 ATMINO43313 823 aaPredicted RBP19.87■□□□□ 0.77
HPS3-204ENST00000462030 HLA-DOAP06340 250 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 RPSAP08865 295 aaKnown RBP19.87■□□□□ 0.77
HPS3-204ENST00000462030 ALAS1P13196 640 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 COMTP21964 271 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 MKRN4PQ13434 485 aaPredicted RBP19.87■□□□□ 0.77
HPS3-204ENST00000462030 MESDQ14696 234 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 LRRC14Q15048 493 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 CLUL1Q15846 466 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 SLC15A2Q16348 729 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 CDC42EP5Q6NZY7 148 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 CCDC25Q86WR0 208 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 DCAF4Q8WV16 495 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 DYDC2Q96IM9 177 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 TMEM109Q9BVC6 243 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 DMAC2Q9NW81 257 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 CEP83Q9Y592 693 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 SMCHD1A6NHR9 2005 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 TAF1LQ8IZX4 1826 aa19.87■□□□□ 0.77
HPS3-204ENST00000462030 UBOX5O94941 541 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 PYGMP11217 842 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 KCNJ1P48048 391 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 PEX5P50542 639 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 HADHBP55084 474 aaKnown RBP19.86■□□□□ 0.77
HPS3-204ENST00000462030 CRY2Q49AN0 593 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 BTNL9Q6UXG8 535 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 HS2ST1Q7LGA3 356 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 EXOC3L1Q86VI1 746 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 BANK1Q8NDB2 785 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 LMO3Q8TAP4 145 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 MGARPQ8TDB4 240 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 MIEF2Q96C03 454 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 STAMBPL1Q96FJ0 436 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 STK24Q9Y6E0 443 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 HSPA6P17066 643 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 CIITAP33076 1130 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 ZNF76P36508 570 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 TRAPPC3LQ5T215 181 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 OTUD6AQ7L8S5 288 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 ZNF720Q7Z2F6 126 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 HOOK2Q96ED9 719 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 HSD17B14Q9BPX1 270 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 NSRP1Q9H0G5 558 aaKnown RBP19.86■□□□□ 0.77
HPS3-204ENST00000462030 PARP2Q9UGN5 583 aa19.86■□□□□ 0.77
HPS3-204ENST00000462030 SNX3O60493 162 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 SLITRK3O94933 977 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 RARGP13631 454 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 CREB1P16220 341 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 KCNJ2P63252 427 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 BFSP1Q12934 665 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 LONRF1Q17RB8 773 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 SEL1L2Q5TEA6 688 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 FBXO11Q86XK2 927 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 ARHGEF19Q8IW93 802 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 CCDC105Q8IYK2 499 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 KIRREL3Q8IZU9 778 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 ART4Q93070 314 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 DDX23Q9BUQ8 820 aaKnown RBP19.85■□□□□ 0.77
HPS3-204ENST00000462030 UBE2TQ9NPD8 197 aaPredicted RBP19.85■□□□□ 0.77
HPS3-204ENST00000462030 KIF1CO43896 1103 aaKnown RBP19.85■□□□□ 0.77
HPS3-204ENST00000462030 ECM2O94769 699 aaPredicted RBP19.85■□□□□ 0.77
HPS3-204ENST00000462030 OAS1P00973 400 aaKnown RBP19.85■□□□□ 0.77
HPS3-204ENST00000462030 COILP38432 576 aaPredicted RBP19.85■□□□□ 0.77
HPS3-204ENST00000462030 DLG4P78352 724 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 PPP2R5AQ15172 486 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 FAM178BQ8IXR5 827 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 RPUSD2Q8IZ73 545 aaKnown RBP19.85■□□□□ 0.77
HPS3-204ENST00000462030 CERKQ8TCT0 537 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 BTBD6Q96KE9 485 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 POP1Q99575 1024 aaKnown RBP19.85■□□□□ 0.77
HPS3-204ENST00000462030 L3MBTL1Q9Y468 752 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 PFASO15067 1338 aa19.85■□□□□ 0.77
HPS3-204ENST00000462030 MYH11P35749 1972 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 CLNS1AP54105 237 aaKnown RBP19.84■□□□□ 0.77
HPS3-204ENST00000462030 NCALDP61601 193 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 SLMAPQ14BN4 828 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 FAM182BQ5T319 152 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 CROCCP2Q86T23 111 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 RBM17Q96I25 401 aaKnown RBP19.84■□□□□ 0.77
HPS3-204ENST00000462030 FGFR1OP2Q9NVK5 253 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 IGLV3-22A0A075B6J6 115 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 EXOC3O60645 756 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 FOSP01100 380 aaPredicted RBP19.84■□□□□ 0.77
HPS3-204ENST00000462030 RARAP10276 462 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 GBP1P32455 592 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 GPC5P78333 572 aa19.84■□□□□ 0.77
HPS3-204ENST00000462030 IKQ13123 557 aaPredicted RBP19.84■□□□□ 0.77
HPS3-204ENST00000462030 LLGL1Q15334 1064 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms