RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 GLRA2P23416 452 aa21.06■□□□□ 0.96
VARS-220ENST00000461874 AXLP30530 894 aa21.06■□□□□ 0.96
VARS-220ENST00000461874 GNL2Q13823 731 aaKnown RBP21.06■□□□□ 0.96
VARS-220ENST00000461874 CAPSQ13938 189 aa21.06■□□□□ 0.96
VARS-220ENST00000461874 KCNC3Q14003 757 aa21.06■□□□□ 0.96
VARS-220ENST00000461874 TMEM184AQ6ZMB5 413 aa21.06■□□□□ 0.96
VARS-220ENST00000461874 TMEM169Q96HH4 297 aa21.06■□□□□ 0.96
VARS-220ENST00000461874 NACC1Q96RE7 527 aa21.06■□□□□ 0.96
VARS-220ENST00000461874 DBR1Q9UK59 544 aaKnown RBP21.06■□□□□ 0.96
VARS-220ENST00000461874 CNTNAP2Q9UHC6 1331 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 INO80B-WBP1J3KQ70 363 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 USO1O60763 962 aaKnown RBP21.05■□□□□ 0.96
VARS-220ENST00000461874 GPR37L1O60883 481 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 GALTP07902 379 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 NCLP19338 710 aaKnown RBP21.05■□□□□ 0.96
VARS-220ENST00000461874 U2AF2P26368 475 aaKnown RBP eCLIP21.05■□□□□ 0.96
VARS-220ENST00000461874 RNASELQ05823 741 aaKnown RBP21.05■□□□□ 0.96
VARS-220ENST00000461874 MBTD1Q05BQ5 628 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 SMC1AQ14683 1233 aaKnown RBP21.05■□□□□ 0.96
VARS-220ENST00000461874 TMEM31Q5JXX7 168 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 TMEM173Q86WV6 379 aaPredicted RBP21.05■□□□□ 0.96
VARS-220ENST00000461874 C4orf32Q8N8J7 132 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 MRPL43Q8N983 215 aaKnown RBP21.05■□□□□ 0.96
VARS-220ENST00000461874 ERMNQ8TAM6 284 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 CCDC51Q96ER9 411 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 POP1Q99575 1024 aaKnown RBP21.05■□□□□ 0.96
VARS-220ENST00000461874 LRFN3Q9BTN0 628 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 NFKBIZQ9BYH8 718 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 POLR3FQ9H1D9 316 aaPredicted RBP21.05■□□□□ 0.96
VARS-220ENST00000461874 RSAD1Q9HA92 442 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 C11orf16Q9NQ32 467 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 NOL7Q9UMY1 257 aaKnown RBP21.05■□□□□ 0.96
VARS-220ENST00000461874 C5orf42Q9H799 3197 aa21.05■□□□□ 0.96
VARS-220ENST00000461874 ALADP13716 330 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 RPA1P27694 616 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 NCBP1Q09161 790 aaKnown RBP21.04■□□□□ 0.96
VARS-220ENST00000461874 AMHR2Q16671 573 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 NOTUMQ6P988 496 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 ZNF280BQ86YH2 543 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 SMG8Q8ND04 991 aaKnown RBP21.04■□□□□ 0.96
VARS-220ENST00000461874 CNNM3Q8NE01 707 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 URGCPQ8TCY9 931 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 IGSF21Q96ID5 467 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 KANSL3Q9P2N6 904 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 DNAJB4Q9UDY4 337 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 USP15Q9Y4E8 981 aaPredicted RBP21.04■□□□□ 0.96
VARS-220ENST00000461874 ARID2Q68CP9 1835 aa21.04■□□□□ 0.96
VARS-220ENST00000461874 C2orf71A6NGG8 1288 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 ST18O60284 1047 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 B4GALT3O60512 393 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 SRGAP2BP0DMP2 458 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 SLC11A1P49279 550 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 AFF1P51825 1210 aaKnown RBP21.03■□□□□ 0.96
VARS-220ENST00000461874 BMS1Q14692 1282 aaKnown RBP21.03■□□□□ 0.96
VARS-220ENST00000461874 POTEGQ6S5H5 508 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 DDX53Q86TM3 631 aaKnown RBP21.03■□□□□ 0.96
VARS-220ENST00000461874 VPS52Q8N1B4 723 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 MCPH1Q8NEM0 835 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 CPB2Q96IY4 423 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 EIF2AQ9BY44 585 aaKnown RBP21.03■□□□□ 0.96
VARS-220ENST00000461874 GBP3Q9H0R5 595 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 CSRNP2Q9H175 543 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 UBN1Q9NPG3 1134 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 GPRC5CQ9NQ84 441 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 IPPQ9Y573 584 aa21.03■□□□□ 0.96
VARS-220ENST00000461874 CXCL14O95715 111 aa21.02■□□□□ 0.96
VARS-220ENST00000461874 ITGA4P13612 1032 aa21.02■□□□□ 0.96
VARS-220ENST00000461874 ARF4P18085 180 aaPredicted RBP21.02■□□□□ 0.96
VARS-220ENST00000461874 TOB1P50616 345 aaPredicted RBP21.02■□□□□ 0.96
VARS-220ENST00000461874 FXR2P51116 673 aaKnown RBP eCLIP21.02■□□□□ 0.962e-12■■■■■ 29.9
VARS-220ENST00000461874 NBR1Q14596 966 aa21.02■□□□□ 0.96
VARS-220ENST00000461874 ANKRD54Q6NXT1 300 aa21.02■□□□□ 0.96
VARS-220ENST00000461874 LLGL2Q6P1M3 1020 aa21.02■□□□□ 0.96
VARS-220ENST00000461874 MAEAQ7L5Y9 396 aa21.02■□□□□ 0.96
VARS-220ENST00000461874 BCL7CQ8WUZ0 217 aaPredicted RBP21.02■□□□□ 0.96
VARS-220ENST00000461874 ZBP1Q9H171 429 aa21.02■□□□□ 0.96
VARS-220ENST00000461874 RNF39Q9H2S5 420 aa21.02■□□□□ 0.96
VARS-220ENST00000461874 RAPGEFL1Q9UHV5 662 aa21.02■□□□□ 0.96
VARS-220ENST00000461874 FAM86C2PA6NEL3 165 aa21.01■□□□□ 0.95
VARS-220ENST00000461874 DCXO43602 365 aa21.01■□□□□ 0.95
VARS-220ENST00000461874 DDHD2O94830 711 aa21.01■□□□□ 0.95
VARS-220ENST00000461874 MUTP22033 750 aa21.01■□□□□ 0.95
VARS-220ENST00000461874 HAUS3Q68CZ6 603 aa21.01■□□□□ 0.95
VARS-220ENST00000461874 PADI6Q6TGC4 694 aa21.01■□□□□ 0.95
VARS-220ENST00000461874 SUSD6Q92537 303 aa21.01■□□□□ 0.95
VARS-220ENST00000461874 TMEM175Q9BSA9 504 aa21.01■□□□□ 0.95
VARS-220ENST00000461874 S1PR5Q9H228 398 aa21.01■□□□□ 0.95
VARS-220ENST00000461874 LRRIQ4A6NIV6 560 aa21■□□□□ 0.95
VARS-220ENST00000461874 INPPL1O15357 1258 aa21■□□□□ 0.95
VARS-220ENST00000461874 B4GALT5O43286 388 aa21■□□□□ 0.95
VARS-220ENST00000461874 CLASP2O75122 1294 aaKnown RBP21■□□□□ 0.95
VARS-220ENST00000461874 POMCP01189 267 aa21■□□□□ 0.95
VARS-220ENST00000461874 ALDH2P05091 517 aa21■□□□□ 0.95
VARS-220ENST00000461874 CTSAP10619 480 aa21■□□□□ 0.95
VARS-220ENST00000461874 CYP11B2P19099 503 aa21■□□□□ 0.95
VARS-220ENST00000461874 PTGDRQ13258 359 aa21■□□□□ 0.95
VARS-220ENST00000461874 PDIA5Q14554 519 aa21■□□□□ 0.95
VARS-220ENST00000461874 SYCE2Q6PIF2 218 aa21■□□□□ 0.95
VARS-220ENST00000461874 CASP10Q92851 521 aa21■□□□□ 0.95
VARS-220ENST00000461874 TMX3Q96JJ7 454 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms