RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 USH1GQ495M9 461 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 ZNF618Q5T7W0 954 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 CDPF1Q6NVV7 123 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.89□□□□□ -1.47
BRCA1-206ENST00000461574 RPAINQ86UA6 219 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 SESTD1Q86VW0 696 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 HELQQ8TDG4 1101 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 FBLIM1Q8WUP2 373 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 DHX38Q92620 1227 aaKnown RBP5.89□□□□□ -1.47
BRCA1-206ENST00000461574 PMEPA1Q969W9 287 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 PBXIP1Q96AQ6 731 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 CYP4F12Q9HCS2 524 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 ECHDC1Q9NTX5 307 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 HDAC6Q9UBN7 1215 aa5.89□□□□□ -1.47
BRCA1-206ENST00000461574 TMEM221A6NGB7 291 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 RSPH10B2B2RC85 870 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 H3BNC9 293 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 M0R296 226 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 STXBP3O00186 592 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 ARIH2O95376 493 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 PRNPP04156 253 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 RSPH10BP0C881 870 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 ZNF286BP0CG31 522 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 PCSK2P16519 638 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 EDNRBP24530 442 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 MPSTP25325 297 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 MZF1P28698 734 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-206ENST00000461574 ADMP35318 185 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 EIF1AXP47813 144 aaKnown RBP5.88□□□□□ -1.47
BRCA1-206ENST00000461574 NDUFV1P49821 464 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 HTRA4P83105 476 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-206ENST00000461574 ARHGAP1Q07960 439 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 RBL2Q08999 1139 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 GPNMBQ14956 572 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 LY6KQ17RY6 165 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 KIAA0753Q2KHM9 967 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 TCTN1Q2MV58 587 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 HERC4Q5GLZ8 1057 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-206ENST00000461574 RRP12Q5JTH9 1297 aaKnown RBP5.88□□□□□ -1.47
BRCA1-206ENST00000461574 TTBK2Q6IQ55 1244 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 PAOXQ6QHF9 649 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 TMEM192Q8IY95 271 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 TTC16Q8NEE8 873 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 PRSS33Q8NF86 280 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 DBF4BQ8NFT6 615 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 SEPT8Q92599 483 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 ANKS1AQ92625 1134 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 PPP2R3CQ969Q6 453 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 FSD1Q9BTV5 496 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 IFIH1Q9BYX4 1025 aaKnown RBP5.88□□□□□ -1.47
BRCA1-206ENST00000461574 CHMP4BQ9H444 224 aaKnown RBP5.88□□□□□ -1.47
BRCA1-206ENST00000461574 FAM86C1Q9NVL1 165 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 DDX19BQ9UMR2 479 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 MRVI1Q9Y6F6 885 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 COL4A6Q14031 1691 aa5.88□□□□□ -1.47
BRCA1-206ENST00000461574 MBTPS2O43462 519 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 DHX16O60231 1041 aaKnown RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 SMARCA5O60264 1052 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 F2P00734 622 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 CTSHP09668 335 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 TOP1P11387 765 aaKnown RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 USP11P51784 963 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 SMAD4Q13485 552 aaKnown RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 COL19A1Q14993 1142 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 SMAD2Q15796 467 aaKnown RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 STXBP2Q15833 593 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 EXOSC6Q5RKV6 272 aaKnown RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 ARHGEF16Q5VV41 709 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 TSHZ3Q63HK5 1081 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 CBLL1Q75N03 491 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 FIBCD1Q8N539 461 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 C2CD4AQ8NCU7 369 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 ASAP3Q8TDY4 903 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 NSUN6Q8TEA1 469 aaKnown RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 CLEC4DQ8WXI8 215 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 EDAQ92838 391 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 ATOH1Q92858 354 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 C11orf84Q9BUA3 381 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 LMAN2LQ9H0V9 348 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 IRF2BPLQ9H1B7 796 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 IL17RBQ9NRM6 502 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 CD207Q9UJ71 328 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 POLIQ9UNA4 740 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 RWDD3Q9Y3V2 267 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 CCDC171Q6TFL3 1326 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 WDR19Q8NEZ3 1342 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 KIAA1671Q9BY89 1806 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 TECTAO75443 2155 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 ARID1BQ8NFD5 2236 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-206ENST00000461574 DMXL1Q9Y485 3027 aa5.87□□□□□ -1.47
BRCA1-206ENST00000461574 MYO7AQ13402 2215 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 KAT6AQ92794 2004 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 ADGRA3Q8IWK6 1321 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 C17orf102A2RUQ5 167 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 SORBS3O60504 671 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 TNFRSF21O75509 655 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 ESRRAP11474 423 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-206ENST00000461574 ZNF200P98182 395 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-206ENST00000461574 HNRNPUQ00839 825 aaKnown RBP eCLIP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms