RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 KIRREL3Q8IZU9 778 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 TBC1D16Q8TBP0 767 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 KMT5AQ9NQR1 393 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 TXLNGQ9NUQ3 528 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 PCDHB4Q9Y5E5 795 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 TMEM120BA0PK00 339 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 FOXN3O00409 490 aaPredicted RBP15.48■□□□□ 0.07
NCL-207ENST00000461347 DDX3XO00571 662 aaKnown RBP eCLIP15.48■□□□□ 0.071e-78■■□□□ 13.1
NCL-207ENST00000461347 CASP5P51878 434 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 DYNLT1P63172 113 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 ITGB3BPQ13352 177 aaPredicted RBP15.48■□□□□ 0.07
NCL-207ENST00000461347 TRPC3Q13507 836 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 KYNUQ16719 465 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 PASD1Q8IV76 773 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 RSAD2Q8WXG1 361 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 DNAJC19Q96DA6 116 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 WNT8AQ9H1J5 351 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 SEL1LQ9UBV2 794 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 PFASO15067 1338 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 UBAP1LF5GYI3 381 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 SARNPP82979 210 aaKnown RBP15.48■□□□□ 0.07
NCL-207ENST00000461347 SEMA4AQ9H3S1 761 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 PPP1R9AQ9ULJ8 1098 aa15.48■□□□□ 0.07
NCL-207ENST00000461347 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.48■□□□□ 0.07
NCL-207ENST00000461347 CFAP73A6NFT4 308 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 DIAPH2O60879 1101 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 SHOX2O60902 331 aaPredicted RBP15.47■□□□□ 0.07
NCL-207ENST00000461347 SPAG7O75391 227 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 PIK3CAP42336 1068 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 DLGAP5Q15398 846 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 SLC10A5Q5PT55 438 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 EPM2AIP1Q7L775 607 aaPredicted RBP15.47■□□□□ 0.07
NCL-207ENST00000461347 CCHCR1Q8TD31 782 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 ZNF384Q8TF68 577 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 RNF25Q96BH1 459 aaPredicted RBP15.47■□□□□ 0.07
NCL-207ENST00000461347 FAM118BQ9BPY3 351 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 TDRD3Q9H7E2 651 aaKnown RBP15.47■□□□□ 0.07
NCL-207ENST00000461347 USP21Q9UK80 565 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.47■□□□□ 0.07
NCL-207ENST00000461347 USP15Q9Y4E8 981 aaPredicted RBP15.47■□□□□ 0.07
NCL-207ENST00000461347 FSBPO95073 299 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 HGSNATQ68CP4 663 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 SPATA21Q7Z572 469 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 CFAP57Q96MR6 1250 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 FGFBP2Q9BYJ0 223 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 NOD2Q9HC29 1040 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 ANKFY1Q9P2R3 1169 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 IPO5O00410 1097 aaKnown RBP15.47■□□□□ 0.07
NCL-207ENST00000461347 NDUFB10O96000 172 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 EIF2AK2P19525 551 aaKnown RBP15.47■□□□□ 0.07
NCL-207ENST00000461347 C11orf70Q9BRQ4 267 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 INTUQ9ULD6 942 aa15.47■□□□□ 0.07
NCL-207ENST00000461347 RGPD5Q99666 1765 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 NKRFO15226 690 aaKnown RBP eCLIP15.46■□□□□ 0.07
NCL-207ENST00000461347 KCNA1Q09470 495 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 RINT1Q6NUQ1 792 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 KAT2BQ92831 832 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 BTBD6Q96KE9 485 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 CIB2O75838 187 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 TAL1P17542 331 aaPredicted RBP15.46■□□□□ 0.07
NCL-207ENST00000461347 TNFRSF8P28908 595 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 CEP170P1Q96L14 293 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 SUFUQ9UMX1 484 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 SPEF2Q9C093 1822 aa15.46■□□□□ 0.07
NCL-207ENST00000461347 SIPA1L3O60292 1781 aaPredicted RBP15.46■□□□□ 0.07
NCL-207ENST00000461347 LRRD1A4D1F6 860 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 LRRIQ4A6NIV6 560 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 TRAPPC3O43617 180 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 RTN2O75298 545 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 KRT1P04264 644 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 BPIFB4P59827 614 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 BRDTQ58F21 947 aaPredicted RBP15.46■□□□□ 0.06
NCL-207ENST00000461347 ANKRD20A8PQ5CZ79 823 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 PRR5LQ6MZQ0 368 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 NT5DC3Q86UY8 548 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 SLC35C1Q96A29 364 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 RILPQ96NA2 401 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 VCXQ9H320 206 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 PRM3Q9NNZ6 103 aa15.46■□□□□ 0.06
NCL-207ENST00000461347 CCDC160A6NGH7 325 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 PPIP5K2O43314 1243 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 LUC7L3O95232 432 aaKnown RBP15.45■□□□□ 0.06
NCL-207ENST00000461347 SSTR3P32745 418 aaPredicted RBP15.45■□□□□ 0.06
NCL-207ENST00000461347 PHBP35232 272 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 PLCB4Q15147 1175 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 MREGQ8N565 214 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 HAS1Q92839 578 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 DDX23Q9BUQ8 820 aaKnown RBP15.45■□□□□ 0.06
NCL-207ENST00000461347 FAM129AQ9BZQ8 928 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 GEMIN8Q9NWZ8 242 aaKnown RBP15.45■□□□□ 0.06
NCL-207ENST00000461347 MYH2Q9UKX2 1941 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 MSH4O15457 936 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 ECM1Q16610 540 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 LBHD1Q9BQE6 289 aaPredicted RBP15.45■□□□□ 0.06
NCL-207ENST00000461347 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.45■□□□□ 0.06
NCL-207ENST00000461347 GOLGA8SH3BPF8 625 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 GOLGA8MH3BSY2 632 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 I3L4J1 428 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 TBX3O15119 743 aa15.45■□□□□ 0.06
NCL-207ENST00000461347 MAPK13O15264 365 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms