RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 KSR1Q8IVT5 923 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 IGSF22Q8N9C0 903 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 PIGOQ8TEQ8 1089 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 TMEM143Q96AN5 459 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 INTS4Q96HW7 963 aaKnown RBP20.47■□□□□ 0.87
COL9A2-205ENST00000461118 NACC1Q96RE7 527 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 MTRQ99707 1265 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 PRRX2Q99811 253 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 IFT122Q9HBG6 1241 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 XPNPEP1Q9NQW7 623 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 CHST12Q9NRB3 414 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 AAASQ9NRG9 546 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 TMEM161AQ9NX61 479 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 DBR1Q9UK59 544 aaKnown RBP20.47■□□□□ 0.87
COL9A2-205ENST00000461118 LZTS1Q9Y250 596 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 STK24Q9Y6E0 443 aa20.47■□□□□ 0.87
COL9A2-205ENST00000461118 PDCP20941 246 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 PLCB3Q01970 1234 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 LAMTOR4Q0VGL1 99 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 PTPN21Q16825 1174 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 SPOUT1Q5T280 376 aaKnown RBP20.46■□□□□ 0.87
COL9A2-205ENST00000461118 HAUS3Q68CZ6 603 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 PDE12Q6L8Q7 609 aaKnown RBP20.46■□□□□ 0.87
COL9A2-205ENST00000461118 ANKRD54Q6NXT1 300 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 FERMT3Q86UX7 667 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 SUGP1Q8IWZ8 645 aaKnown RBP20.46■□□□□ 0.87
COL9A2-205ENST00000461118 THNSL1Q8IYQ7 743 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 TRAIPQ9BWF2 469 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 RAB34Q9BZG1 259 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 LRWD1Q9UFC0 647 aa20.46■□□□□ 0.87
COL9A2-205ENST00000461118 HIDE1A8MVS5 230 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 CSDE1O75534 798 aaKnown RBP20.45■□□□□ 0.86
COL9A2-205ENST00000461118 FGFR4P22455 802 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 SFPQP23246 707 aaKnown RBP eCLIP20.45■□□□□ 0.86
COL9A2-205ENST00000461118 POU5F1BQ06416 359 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 MXD4Q14582 209 aaPredicted RBP20.45■□□□□ 0.86
COL9A2-205ENST00000461118 SRGAP1Q7Z6B7 1085 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 MRPS27Q92552 414 aaKnown RBP20.45■□□□□ 0.86
COL9A2-205ENST00000461118 NLRP4Q96MN2 994 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 CASD1Q96PB1 797 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 ATP6V0A4Q9HBG4 840 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 DACT1Q9NYF0 836 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 CDH22Q9UJ99 828 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 DENND4AQ7Z401 1863 aa20.45■□□□□ 0.86
COL9A2-205ENST00000461118 A0A0U1RQF3 1178 aa20.44■□□□□ 0.86
COL9A2-205ENST00000461118 FSD2A1L4K1 749 aa20.44■□□□□ 0.86
COL9A2-205ENST00000461118 K7ELQ4 463 aaPredicted RBP20.44■□□□□ 0.86
COL9A2-205ENST00000461118 LAG3P18627 525 aa20.44■□□□□ 0.86
COL9A2-205ENST00000461118 AVPR2P30518 371 aa20.44■□□□□ 0.86
COL9A2-205ENST00000461118 ATP2C1P98194 919 aaPredicted RBP20.44■□□□□ 0.86
COL9A2-205ENST00000461118 IL17AQ16552 155 aa20.44■□□□□ 0.86
COL9A2-205ENST00000461118 PLPP4Q5VZY2 271 aa20.44■□□□□ 0.86
COL9A2-205ENST00000461118 BRAPQ7Z569 592 aa20.44■□□□□ 0.86
COL9A2-205ENST00000461118 SNX21Q969T3 373 aa20.44■□□□□ 0.86
COL9A2-205ENST00000461118 CCDC43Q96MW1 224 aaKnown RBP20.44■□□□□ 0.86
COL9A2-205ENST00000461118 BMP2KQ9NSY1 1161 aaPredicted RBP20.44■□□□□ 0.86
COL9A2-205ENST00000461118 ZFHX2Q9C0A1 2572 aaPredicted RBP20.44■□□□□ 0.86
COL9A2-205ENST00000461118 A0A087WWV3 80 aa20.43■□□□□ 0.86
COL9A2-205ENST00000461118 PDGFBP01127 241 aaPredicted RBP20.43■□□□□ 0.86
COL9A2-205ENST00000461118 SRGAP2CP0DJJ0 459 aa20.43■□□□□ 0.86
COL9A2-205ENST00000461118 ARL2P36404 184 aa20.43■□□□□ 0.86
COL9A2-205ENST00000461118 POTEGQ6S5H5 508 aa20.43■□□□□ 0.86
COL9A2-205ENST00000461118 DTHD1Q6ZMT9 781 aa20.43■□□□□ 0.86
COL9A2-205ENST00000461118 TCF25Q9BQ70 676 aa20.43■□□□□ 0.86
COL9A2-205ENST00000461118 TMEM117Q9H0C3 514 aa20.43■□□□□ 0.86
COL9A2-205ENST00000461118 FAM86C1Q9NVL1 165 aa20.43■□□□□ 0.86
COL9A2-205ENST00000461118 DMDP11532 3685 aa20.43■□□□□ 0.86
COL9A2-205ENST00000461118 EOMESO95936 686 aa20.42■□□□□ 0.86
COL9A2-205ENST00000461118 CCT6AP40227 531 aaKnown RBP20.42■□□□□ 0.86
COL9A2-205ENST00000461118 PBX3P40426 434 aa20.42■□□□□ 0.86
COL9A2-205ENST00000461118 PCBP1Q15365 356 aaKnown RBP eCLIP20.42■□□□□ 0.86
COL9A2-205ENST00000461118 ECM1Q16610 540 aa20.42■□□□□ 0.86
COL9A2-205ENST00000461118 ARL6IP4Q66PJ3 421 aaKnown RBP20.42■□□□□ 0.86
COL9A2-205ENST00000461118 KCNT2Q6UVM3 1135 aa20.42■□□□□ 0.86
COL9A2-205ENST00000461118 CATSPER4Q7RTX7 472 aa20.42■□□□□ 0.86
COL9A2-205ENST00000461118 ECHDC2Q86YB7 292 aa20.42■□□□□ 0.86
COL9A2-205ENST00000461118 IFNLR1Q8IU57 520 aaPredicted RBP20.42■□□□□ 0.86
COL9A2-205ENST00000461118 RNF149Q8NC42 400 aa20.42■□□□□ 0.86
COL9A2-205ENST00000461118 SNX27Q96L92 541 aa20.42■□□□□ 0.86
COL9A2-205ENST00000461118 APOL5Q9BWW9 433 aa20.42■□□□□ 0.86
COL9A2-205ENST00000461118 HOXA2O43364 376 aa20.41■□□□□ 0.86
COL9A2-205ENST00000461118 PTENP60484 403 aa20.41■□□□□ 0.86
COL9A2-205ENST00000461118 TFDP1Q14186 410 aa20.41■□□□□ 0.86
COL9A2-205ENST00000461118 LLGL2Q6P1M3 1020 aa20.41■□□□□ 0.86
COL9A2-205ENST00000461118 ZNF598Q86UK7 904 aaKnown RBP20.41■□□□□ 0.86
COL9A2-205ENST00000461118 MCPH1Q8NEM0 835 aa20.41■□□□□ 0.86
COL9A2-205ENST00000461118 NFKBIZQ9BYH8 718 aa20.41■□□□□ 0.86
COL9A2-205ENST00000461118 MINDY3Q9H8M7 445 aa20.41■□□□□ 0.86
COL9A2-205ENST00000461118 USO1O60763 962 aaKnown RBP20.4■□□□□ 0.86
COL9A2-205ENST00000461118 SYT1P21579 422 aa20.4■□□□□ 0.86
COL9A2-205ENST00000461118 PHKA2P46019 1235 aa20.4■□□□□ 0.86
COL9A2-205ENST00000461118 CLLU1OSQ5K130 101 aa20.4■□□□□ 0.86
COL9A2-205ENST00000461118 KRT79Q5XKE5 535 aa20.4■□□□□ 0.86
COL9A2-205ENST00000461118 SNX29Q8TEQ0 813 aa20.4■□□□□ 0.86
COL9A2-205ENST00000461118 RIPOR3Q96MK2 946 aa20.4■□□□□ 0.86
COL9A2-205ENST00000461118 NGRNQ9NPE2 291 aaKnown RBP20.4■□□□□ 0.86
COL9A2-205ENST00000461118 AGPAT5Q9NUQ2 364 aa20.4■□□□□ 0.86
COL9A2-205ENST00000461118 KIAA1024Q9UPX6 916 aa20.4■□□□□ 0.86
COL9A2-205ENST00000461118 PIN4Q9Y237 131 aaKnown RBP20.4■□□□□ 0.86
COL9A2-205ENST00000461118 C2orf16Q68DN1 1984 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms